Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq165 104 6e-17 seq54 96.9 8e-15 >seq165 Length=362420 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || ||||| || || || ||||| | || || || |||||| Sbjct 206504 CAGATCTTTGTCAAGACTCTCACCGGCAAGACTATCACCCTTGAGGTCGAGTCTTCTGAT 206563 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | || | || ||| ||||||||||| || || || || || ||| || Sbjct 206564 AGTATTGAGGCGGTGAAGGGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGACCAACAG 206623 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| |||||| | ||||||||| | || | |||| || || || Sbjct 206624 CGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGTACCCTTTCCGACTATAATATC 206683 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| |||||||| |||||||||| Sbjct 206684 CAGAAGGAGTCTACCCTTCACCTTG 206708 Score = 102 bits (112), Expect = 2e-16 Identities = 77/91 (85%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 204765 CAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCA 204824 |||||||||| |||||||| ||||||| ||||||||| | | || | ||||||||| | Sbjct 206708 CAAGGTGAAGGGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAA 206649 Query 204825 GCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||| |||||||||||||| || ||||| Sbjct 206648 GCTGCTTGCCGGCGAAGATAAGACGCTGTTG 206618 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || || ||||| | ||||| || || |||| |||| | Sbjct 206798 AAGACGCTCACCGGCAAGACCATCACCCTTGAAGTCGAGTCCTCCGACAGTATCGAGGCT 206857 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||||||| || || || || || || || | || |||||| Sbjct 206858 GTTAAGGGAAAGATTCAAGACAAGGAGGGCATCCCTCCCGATCAACAGCGTCTCATCTTC 206917 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||| | || || || | ||| | ||||||| ||| ||||||| |||||| Sbjct 206918 GCTGGCAAACAGCTTGAGGACGGTCGTACTCTCTCCGATTATAACATCCAGAAGGAGTCT 206977 Query 206365 ACTCTTCACCTTGT 206378 ||||||||||| || Sbjct 206978 ACTCTTCACCTCGT 206991 Score = 86.0 bits (94), Expect = 1e-11 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || ||||| || || || || | ||| |||| || || ||| Sbjct 207014 CAGATCTTTGTCAAGACTCTCACCGGCAAGACCATACCCTTG-AAGTTGAGTCCTCCGAC 207072 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| | || ||| ||||| || || || || || || |||||| || Sbjct 207073 AGTATCGAGGCCGTGAAGGGCAAGATCCAGGACAAGGA-GGCATCCCTCCGGACCAACAG 207131 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| || ||| | ||||||||| | || | ||||||||||| | Sbjct 207132 CGCCTGATCTTTGCCGGCAAACAGCTCGAAGATGGACGTACCCTTTCCGATTACAACATT 207191 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||||||||| ||||| || Sbjct 207192 CAGAAGGAGTCTACTCTCCACCTGGT 207217 >seq54 Length=1324731 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || ||||| || |||||| | || || || |||||| Sbjct 967089 CAGATCTTTGTCAAGACCTTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCTGAC 967148 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| | || || |||||||| || || || || ||| |||||| || Sbjct 967149 TCCATCGAGGCCGTCAAAGGCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAGCAG 967208 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||| |||||||| |||||| | || || || |||| | |||| ||||| || Sbjct 967209 CGTCTTATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGGACCCTCTCCGACTACAATATC 967268 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || |||||||||||||| || Sbjct 967269 CAGAAGGAATCTACTCTTCACCTCGT 967294 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || |||||||| | || || || ||||||| Sbjct 967317 CAGATCTTCGTCAAGACTTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCTGAC 967376 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| | || ||| ||||| || || || || || || || ||| || Sbjct 967377 TCTATCGAGGCCGTCAAGGGCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAG 967436 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | || ||||| | || ||| |||| |||||| || Sbjct 967437 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGTCCGACTACAACATC 967496 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| ||||| |||||||| |||| Sbjct 967497 CAGAAGGAGTCGACTCTTCATCTTG 967521 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || |||||||| | || || || ||| ||| Sbjct 967829 CAGATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCCGAC 967888 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| | || ||| |||||||| || || || || || |||||| || Sbjct 967889 TCCATCGAGGCCGTCAAGGGTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 967948 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||| || |||||| | || ||||| | ||| | | ||||||||| || Sbjct 967949 CGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCTGATTACAACATC 968008 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| |||||||| |||||||||||| Sbjct 968009 CAGAAGGAGTCTACCCTTCACCTTGTT 968035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815999960957