Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq58 91.5 1e-13 seq165 89.7 5e-13 seq124 87.8 2e-12 seq54 84.2 2e-11 >seq58 Length=3253204 Score = 91.5 bits (100), Expect = 1e-13 Identities = 280/425 (66%), Gaps = 10/425 (2%) Strand=Plus/Minus Query 146895 GACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTC 146954 ||| || || |||||||| || || || || | | || | ||||| ||| ||||||| Sbjct 1340072 GACAACCTGGAACTCGCCGGCGAGAACGCGACGGGTGTAGATGTTGCTGGTGTAAGGCTC 1340013 Query 146955 AAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAA 147014 ||| | || || || || | || ||| ||| | |||||||||||| || | | Sbjct 1340012 GAAACATTCGTTGTTACCGAGGATCTGGCTCGTAGAGGCGGTAGGCATGGGAGCAAGGAG 1339953 Query 147015 CAATGAATTTCGCAGACC-GTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACA 147073 | || || | ||||| || ||| | | || ||||| | | ||||||||| | Sbjct 1339952 AAGGGAGTTCCTGAGACCAGTGCGCGC-CACCTTCTCCTTGAGCGAGGCCCAGTCCCAGA 1339894 Query 147074 --TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGC--ACTCCTCGACTGGCGGGA 147129 ||| || || || || ||||| ||||||||| ||| || ||| | || || || Sbjct 1339893 GGTCG--GAAGGAGTTACACCCCACAAGTCGTACTGAAGCTGAC-CCTTG-CTTGCAGGG 1339838 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 || || || |||| |||| || ||| || |||| || | || ||||| | Sbjct 1339837 CTTCCCTCGTACGTCTCGTAGGGCCCATCGATCTCAGCCATGTCGCTACTGGCCTCAACG 1339778 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 ||| | | ||| ||||| ||| ||| || | ||| |||||| ||||| ||| Sbjct 1339777 GCTGCGTGGTAGATGGTCTCGAAGATCTGCTGGTTAAGGACGCGTGCTTCAGGCGAGTCG 1339718 Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 | ||||| |||||| || || ||||| || | ||| || | |||||| ||||| || Sbjct 1339717 AAGGGCATGCGCAGAGCCATGAAAGCATCCGCGAGACCTTGCACACCGACACCGATGGGG 1339658 Query 147310 CGATG 147314 || || Sbjct 1339657 CGGTG 1339653 >seq165 Length=362420 Score = 89.7 bits (98), Expect = 5e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||| ||| | |||||| ||||||||||||||| |||| | Sbjct 207202 GACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCGAGCTGTTTGCCGGCA 207143 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTT 132026 |||| || |||||||| || ||||| |||||| ||| Sbjct 207142 AAGATCAGGCGCTGTTGGTCCGGAGGGATGCCTCCTT 207106 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || || || |||||| | |||||| |||||| ||||| || |||| Sbjct 206694 GACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCGGCG 206635 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||||||||| || ||||| ||||| || ||||| ||| || |||| | Sbjct 206634 AAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTCACC 206575 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 || | | |||| | | ||| || || | || | || || || || ||||| || Sbjct 206574 GCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTCTTG 206515 Query 132110 ATGAAAATCTGCATGACT 132127 | || ||||||||| || Sbjct 206514 ACAAAGATCTGCATGCCT 206497 >seq124 Length=638099 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||||||||||| |||||| ||| |||||||| || || | | Sbjct 263076 GACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCATCCTCGAGCTGCTTTCCAGCA 263135 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 |||| ||||| ||||| || ||||| |||| Sbjct 263136 AAGATGAGACGTTGTTGGTCCGGAGGAATGC 263166 >seq54 Length=1324731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || |||||| ||| |||||||| || |||| Sbjct 967507 GACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGCTGCTTGCCGGCG 967448 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || ||||| ||||| || ||||| || || || | Sbjct 967447 AAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGCCCTTGACG 967388 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 || | || || | | ||| || || | ||| | ||| || || |||| ||| || Sbjct 967387 GCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCGGTCAAAGTCTTG 967328 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 967327 ACGAAGATCTGCAT 967314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609311428120