Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 320 2e-81 >seq1 Length=1832336 Score = 320 bits (354), Expect = 2e-81 Identities = 423/577 (73%), Gaps = 21/577 (4%) Strand=Plus/Minus Query 1455743 CGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGA 1455802 ||||| || || ||||| |||| ||||| ||| ||| |||||||| || |||||||| Sbjct 896548 CGCTTCGTTCTATTCCCTATCCAATACCATGAGATCTGGCAAATGTAC-AAGAAGGCCGA 896490 Query 1455803 GGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTC 1455862 ||||||||| ||||| || |||||| | |||||| | ||| | | |||||| | Sbjct 896489 GGCCTCCTTCTGGACAGCAGAGGAGATGGACCTCTCCAAGGACCAGCACGACTGGGAGAA 896430 Query 1455863 G---CTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCA 1455919 | || | |||| |||||||||| |||||| |||||||| ||||| || ||| ||| Sbjct 896429 GAAGCTCAACGACAACGAGCGCCACTTCATCTCCCACGTCCTTGCCTTCTT-CGCTGCCT 896371 Query 1455920 GCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAG 1455979 ||| || ||||| ||||||||| | || || || || ||||| || | | Sbjct 896370 CCGACGGTATCGTCAACGAGAACCTCGTCGAGCGATTCTCCAACGAGGTGCAGGCCGCCG 896311 Query 1455980 AGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACT 1456039 |||| |||| || ||||| ||||||||| || || ||||||||||| || || |||| Sbjct 896310 AGGCGCGTTGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACATACT 896251 Query 1456040 CGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAG---GACCACCTCTTTCGCG 1456096 | ||||| |||||||||||| |||||||||| | || || || ||||||| || Sbjct 896250 CCCTCCTCATCGACACCTACATCAAGGACCC---CAAGCAGCGCGAATACCTCTTCGACG 896194 Query 1456097 CCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCA--- 1456153 ||||||| || | || | | | ||| |||||||||||||| || ||||||| Sbjct 896193 CCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTGCGCTGGATCACAG 896134 Query 1456154 ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCAT 1456212 ||||| | |||| | ||| |||||||| ||||||| ||| |||| ||||||||| || Sbjct 896133 ACAAGAA----CTCGTC-CTTCGCCGAGCGTCTCGTCGCCTTCGCCGCCGTCGAGGGTAT 896079 Query 1456213 CTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||| ||||| ||| ||| | | ||||| |||||||||||||| ||||| ||||| || Sbjct 896078 CTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGG 896019 Query 1456273 TCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 || || ||| |||||| | ||||| || ||||| Sbjct 896018 TC-TCACCTTCTCCAACGAGCTCATCAGCCGTGACGA 895983 Score = 187 bits (206), Expect = 4e-41 Identities = 371/534 (69%), Gaps = 19/534 (4%) Strand=Plus/Plus Query 1455785 ATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGA 1455844 |||||| || ||| ||||||||||||| ||||||||||| ||| | |||||||| ||| Sbjct 897762 ATGTACAAACAAG-CCGAGGCCTCCTTCTGGACCGCCGAAGAGATAGACCTCGGACACGA 897820 Query 1455845 CACGGTCCACTGGGTGT--CGCTGAGCG-ACGACGAGCGCCATTTCATCAAGCACGTCCT 1455901 | ||| ||||| ||| || || ||| ||| |||||| |||||| || Sbjct 897821 CCTAGTCGACTGGAACGACCGCCTCACGCACCCCGAACGCACCTTCATCTCGCACGTGCT 897880 Query 1455902 CGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGA 1455961 |||||| || ||||||| ||| ||||||||| ||| ||||| | || || || | Sbjct 897881 CGCCTTCTT-CGCCGCCTCCGACGGCATCGTGAACGAAAACCTCGTCGAGCGGTTCTCCA 897939 Query 1455962 AAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACA 1456021 | || |||||| | | ||||| || | || ||||||||||||||| || || ||| Sbjct 897940 ACGACGTCCAAGTCGCCGAGGCGCGCTGTTTCTACGGGTTCCAGATCATGATGGAGAACG 897999 Query 1456022 TCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGG 1456081 | ||||| || || || ||| | || || |||||||| |||||||||| ||| || Sbjct 898000 TGCACTCCGAGACGTATTCGTTGCTCATTGACACCTATATCAAGGACCCACGGGAGCGGG 898059 Query 1456082 ACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGA 1456141 | | | ||| || || || || || |||| | | || ||||| |||||||| Sbjct 898060 AGTATTTGTTTGCTGCGATTGAGACTGTCCCGTGTATCAAGAGGAAGGCGGACTGGGCTC 898119 Query 1456142 TGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGC 1456198 | |||||| |||| ||| | || ||||| | | |||| || | ||||| Sbjct 898120 TCCGGTGGATATCTGACAA-AAGGACGTC----CTTTGGGGTGAGGCTGGTGGCGTTTGC 898174 Query 1456199 CG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGCTCAAGAAGC 1456256 | ||| || || || || ||||| || || |||| | || |||||| | ||||||| Sbjct 898175 GGTCGTGGAAGGTATATTCTTCTCTGGGTCCTT-TGCGTCGATATTTTGGTTGAAGAAGC 898233 Query 1456257 GCGGCCTCATGCCCGGTCTTCTGCTTTAGC-AACGAATTTATCAGTCGCGACGA 1456309 | ||||| ||||| || ||| |||| | |||||| | |||||||| ||||| Sbjct 898234 GTGGCCTTATGCCAGG-CTT-GACTTTCTCGAACGAACTCATCAGTCGAGACGA 898285 Score = 156 bits (172), Expect = 6e-32 Identities = 190/254 (75%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 1456520 CAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTG 1456579 |||||||||||||||||||||| |||||| | ||||| | | || |||| || || Sbjct 895909 CAGATCATCGTCGAGGCCGTCGCCATCGAGCAGGAGTTCCTGACGGACGCGCTCCCCGTC 895850 Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639 | ||||||||||||||||| | | | |||||||||||||| | | || ||||| |||| Sbjct 895849 TCTCTCATCGGCATGAACGCGA-AGTTGATGTGCCAGTACATCG-AGTTCGTCGCGGACC 895792 Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699 | ||||| ||||| || | |||| ||||||| || | ||||| ||| | Sbjct 895791 GTCTGCTGTGCGCGCTTGG-TAACGAGAGGCACTACAACTCGACGAACCCCTTCGATTTC 895733 Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTAC 1456758 ||||| ||||||||||| |||||||||||||||| |||||| || || | || ||| Sbjct 895732 ATGGATATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTTTCGGACTAC 895673 Query 1456759 GCCAAGGCCGGCGT 1456772 ||||||| || || Sbjct 895672 TCCAAGGCTGGTGT 895659 Score = 98.7 bits (108), Expect = 1e-14 Identities = 131/177 (74%), Gaps = 4/177 (2%) Strand=Plus/Plus Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || || |||||||||||| | ||||||| | || ||||| || || || || ||||||| Sbjct 898491 CTAATAGGCATGAACGCCGC-GCTCATGCGTCAATACATCGAGTTC-GTAGCAGACCGCC 898548 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| ||| ||||| | || |||||||||| | || ||||||||| | ||| Sbjct 898549 TGCTACAGGCTCTCGGGAAC-GACAAGCACTACCACGCCGCGAACCCGTTCGACTTTATG 898607 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTG-GCGAGTAC 1456758 || ||||||| || |||| ||||| ||||| || ||| |||||| ||||||| Sbjct 898608 GACATGATCTCCCTGCAGGGGAAGACAAACTTCTTTGAGAAGCGCGTGTCCGAGTAC 898664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177780624767354