Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq165 131 2e-25 seq54 116 4e-21 >seq165 Length=362420 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||||||||| || || || ||||| || ||||| || ||| Sbjct 207009 CCTCCACGAAGACGAAGCACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGGAG 206950 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| || ||||||||||| || || || | |||||| |||||||| || Sbjct 206949 AGAGTACGACCGTCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGG 206890 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || |||||||| ||| || || || || | ||||||| || || || Sbjct 206889 ATGCCCTCCTTGTCTTGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGACT 206830 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | || |||||||| || ||||| Sbjct 206829 TCAAGGGTGATGGTCTTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Score = 114 bits (126), Expect = 1e-20 Identities = 164/227 (72%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| |||| ||| ||||| || || || ||||| ||||||||||| ||| | Sbjct 207234 CCTCCACGGAGACGCA-CACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAA 207176 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||||||||| ||||| |||| ||||| || || || || Sbjct 207175 AGGGTACGTCCATCTTCGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGG 207116 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || || || | ||||||| || || || Sbjct 207115 ATGCC-TCCTTGTCCTGGATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACT 207057 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | ||| || || || || ||||| Sbjct 207056 TCAAGGGT-ATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 207011 >seq54 Length=1324731 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | || || || || ||||| ||||| |||||||||||||| | Sbjct 967824 CCTCCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 967765 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || |||||||| ||||| || || || | ||||||||| ||||| || Sbjct 967764 AGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 967705 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || ||| || || || || | | ||| || || || || Sbjct 967704 ATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACC 967645 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| || || || ||||| || ||||| Sbjct 967644 TCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || || || || ||||| || |||||||||||| | ||| || || |||||| Sbjct 967519 AGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGC 967460 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || || || | ||||||||| ||||| || ||||| || || || || || Sbjct 967459 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATC 967400 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| || || | | ||| || || || || || || || || || || ||| Sbjct 967399 TTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCG 967340 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || ||||| || ||||| Sbjct 967339 GTCAAAGTCTTGACGAAGATCTGCAT 967314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396397358840