Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq54 109 5e-19 seq165 105 6e-18 >seq54 Length=1324731 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || |||||||||||| | | | || |||| |||||||| || ||| Sbjct 967282 GTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCG 967223 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||| |||||||| || ||||| || | |||||| || || |||||| ||| Sbjct 967222 GCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGCCTTTG 967163 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | || || | | ||| | || ||||| || ||||| || | || || |||| || Sbjct 967162 ACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTC 967103 Query 27231 TTCACAAAGATTTGCATA 27248 || |||||||| |||||| Sbjct 967102 TTGACAAAGATCTGCATA 967085 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 27037 ATACCAA-ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 ||||||| ||| | || || || || || || ||||||||| || | | || | || Sbjct 967525 ATACCAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCC 967466 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 |||||||| || |||||| | ||||||||||| || || || || | ||||| ||||| Sbjct 967465 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCC 967406 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 ||||||| || | || || | || ||| | | || || || || || || | Sbjct 967405 TGGATCTTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTC 967346 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 ||||| |||| ||| || || ||||| |||||| || Sbjct 967345 TTGCCGGTCAAAGTCTTGACGAAGATCTGCATACCT 967310 >seq165 Length=362420 Score = 105 bits (116), Expect = 6e-18 Identities = 163/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| || | |||| |||| || | ||||| || || ||||| ||||| ||| Sbjct 207236 TGCCTCCACGGAGACGCAC-ACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGG 207178 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || | |||||||||||||| ||||| | || || |||||||| ||||| | Sbjct 207177 AAAGGGTACGTCCATCTTCGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAG 207118 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||| || || ||||||| |||| || || | | |||| | || |||| Sbjct 207117 GGA-TGCCTCCTTGTCCTGGATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAA 207059 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| || | ||| | ||||| || ||||| || |||||||| ||||| Sbjct 207058 CTTCAAG-GGTATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 207011 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || ||||| |||||| | | | || | ||||| ||||| || ||| Sbjct 206697 GTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCG 206638 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || ||||||||||| || || || | ||||| ||||| |||||| ||| Sbjct 206637 GCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTC 206578 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | | | || | | || || || || || |||| ||||| || ||||| Sbjct 206577 ACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTC 206518 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||| ||||| Sbjct 206517 TTGACAAAGATCTGCAT 206501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932758292504