Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq255 102 1e-16 seq1 95.1 2e-14 >seq255 Length=1613832 Score = 102 bits (112), Expect = 1e-16 Identities = 238/350 (68%), Gaps = 22/350 (6%) Strand=Plus/Minus Query 181625 ACCCGTACCGATACCCTCGGTTCCATTCACGAGAACCATTGGTAAAGTTGGCATGTAAAA 181684 ||| |||||||||||||| | || || ||||| | ||| || | ||||| || | Sbjct 617585 ACCAGTACCGATACCCTCAGCACCGTTGACGAGGATCATAGGAATGACGGGCATATACCA 617526 Query 181685 GTCTGGTTCAATG--GAGCGTCCATCATCGTCCAAGTAGTTGAGGATCGGGTCATCCCGA 181742 || ||||||||| | ||| |||||| | ||||||||| |||| || || || | | Sbjct 617525 CTCGGGTTCAATGTCCAACGT--ATCATCCTTCAAGTAGTTAAGGAGAGGATCGTCGCCA 617468 Query 181743 GGATCAAAGATCTTGCGAGCCTCCTTGGTAAGTTTTGTGAAGATATACCTCGTTTGAGAA 181802 |||| || | | || ||| | | | | |||||||||||||||| ||| Sbjct 617467 GGATGGAACAGTGTACGGGCCATCAACGACGGCTCGGTGAAGATATACCTCG---CAGAG 617411 Query 181803 GC---GTCTTTACCACCCATGA-GACGCGTACCAAATTGACCACATGGCTCAAGAAGGTT 181858 || |||||||| ||| ||| ||| ||||| ||||||||| ||| || | ||| Sbjct 617410 GCATGATCTTTACCGCCC-TGATCACGAGTACCGAATTGACCATTCGGCATGAGCAAGTT 617352 Query 181859 AATGTTGTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGT-ATCCGCAAGGGACA 181917 |||||||| || | ||||| | ||||| || |||||||| ||| ||| || Sbjct 617351 GATGTTGTTACTGCCGATGTAGTCTTGCGCCAAGTTGACGATGGTCATCATCAA---ACT 617295 Query 181918 CT--TCACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACT 181965 | || |||||||| || |||| ||| || | || ||| ||||||| Sbjct 617294 TTGCTCGCCGTGGTGATACGCTGCCTTTTCGGAAATATA----GCCAACT 617249 >seq1 Length=1832336 Score = 95.1 bits (104), Expect = 2e-14 Identities = 167/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||||| || ||| || || || || |||||| ||||| Sbjct 895961 GGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACC 896020 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| || || |||||||| | ||| | |||| | ||| || |||||||||||||| Sbjct 896021 AGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGAT 896080 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAA 122836 |||||| || || || || | || || ||||||||||| |||| ||| | | Sbjct 896081 ACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGA-CGAGTTCTTGTCTGTGA 896139 Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 122896 ||| || ||||| | |||||||||| || || || | || | |||||| || | Sbjct 896140 TCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGA 896199 Query 122897 A 122897 | Sbjct 896200 A 896200 Score = 86.0 bits (94), Expect = 8e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||||| ||||| || ||||| || ||||| | ||| Sbjct 898306 GCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTCAAGCCT 898247 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| || || ||||||||||||||| | || | |||| || ||||| |||||||| || Sbjct 898246 GGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCA-AAGGACCCAGAGAAGAATAT 898188 Query 122778 ACCCTCCACACACGCAAACGC 122798 ||| ||||| ||||||||| Sbjct 898187 ACCTTCCACGACCGCAAACGC 898167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029511423200