Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 172 7e-38 seq58 93.3 5e-14 >seq1 Length=1832336 Score = 172 bits (190), Expect = 7e-38 Identities = 540/816 (66%), Gaps = 23/816 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 |||||| ||| ||||||||||||||||| ||||| || | | ||| | ||||| Sbjct 895674 TAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATATCCATG 895733 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACT-CCAATCTGTTTGAGGAGACG 129846 ||||| || |||||| | ||||| | | || | | |||| | || ||||| Sbjct 895734 AAATCGAAGGGGTTCGTCGAGTTGTAG-TGCCTCTCGTTACCAAGCGCGCACAGCAGACG 895792 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG-GTTAC 129905 |||| |||| |||| ||||||| ||||| || | |||||| |||||||| | || Sbjct 895793 GTCCGCGACGAACTCGATGTACTGGCACATCAACTTCGCGTTCATGCCGATGAGAGAGAC 895852 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 |||||||||||| | |||| ||| ||| ||| | || || || | ||| | Sbjct 895853 G-GGGAGCGCGTCCGTCAGGAACTCCTGCTCGATGGCGACGGCCTCGACGATGATCTGGC 895911 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCA--AAGTCTT-GAAGAGTTCCACGGCAAACT 130022 | | | || | | ||| | |||| | || |||||| |||||| | Sbjct 895912 GGACGACGTCGGGGTGAGGACG---GCGCCTGAGGTGGGAGAAGAGGAGGCAGGCAAAGT 895968 Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082 | ||| | |||||||||||| |||||| || || |||||| ||||| ||||| | Sbjct 895969 CGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATCA 896028 Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142 | || |||||||| | |||||| || | || ||||| ||||||||||| ||||| | Sbjct 896029 GGCCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGA 896088 Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTAT-CAAACCACTTC 130201 | ||||| || | ||||||||| || ||||| || | |||| | | ||| | Sbjct 896089 CGGCGGCGAAGGCGACGAGACGCTCGGCGAAGGA-CGAGTTCTTGTCTGTGATCCAGCGC 896147 Query 130202 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCC 130261 | ||||| | ||||| |||| ||| || |||| ||||| ||| || || ||||| | Sbjct 896148 AGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTCGAAGAGGT-A 896206 Query 130262 TTCTTTTCTGAT--GGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCAT 130319 ||| ||| | || || |||||||| | || ||||| || ||||| ||| | Sbjct 896207 TTC-GCGCTGCTTGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTCGGAGT 896265 Query 130320 GGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACC 130378 ||| | | ||| || | ||| | ||||||| | ||||| ||| ||| ||| Sbjct 896266 GGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAACGCGCCTCGGCGGCCTGCACC 896324 Query 130379 TCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAA 130437 || | || | ||| | | || ||||| || || || ||||| |||| || || Sbjct 896325 TCGT-TGGAGAATCGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAGGCAGCGAAGAA 896383 Query 130438 CGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTT---CCAGTCGTC 130494 || |||| | ||||| | | || || ||||| || |||| |||||||| Sbjct 896384 GGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTCTTCTCCCAGTCGTG 896443 Query 130495 AAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 | ||||| ||||| || | |||||| || ||||| Sbjct 896444 CTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCA 896479 Score = 131 bits (144), Expect = 2e-25 Identities = 244/353 (69%), Gaps = 4/353 (1%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||||| || ||||||||| |||||||| || ||| Sbjct 898306 GCAAAGTCGGTGTGCATGCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTCAAGCCT 898247 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| || || |||||||||||||| || |||| ||| || ||||||||||| || Sbjct 898246 GGCATAAGGCCACGCTTCTTCAACCAAAATATCGACGCAAAGGACCCAGAGAAGAATATA 898187 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAA 130194 || ||||| ||| ||||| | || | | | ||||||| || ||||| | | Sbjct 898186 CCTTCCACGACCGCAAACGCCACCAGCCTCACCCCAAAGGA-CGTCCTTTTGTCAGATAT 898128 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 |||| | ||||| | |||||| ||| |||||||||||| |||| ||||| |||| Sbjct 898127 CCACCGGAGAGCCCAGTCCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGCAGCAAA 898068 Query 130255 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 130314 | | || | || ||| || ||||| || | || ||||| ||||| || || Sbjct 898067 CAAATACTCCCGCTCCCGTGGGTCCTTGATATAGGTGTCAATGAGCAACGAATACGTCTC 898008 Query 130315 GCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 130366 | || || | | ||| || | ||| || |||||||| ||||||| ||| Sbjct 898007 GGAGTGCACGTTCTCCATCAT-GATCTGGAACCCGTAGAAACAGCGCGCCTCG 897956 >seq58 Length=3253204 Score = 93.3 bits (102), Expect = 5e-14 Identities = 161/227 (71%), Gaps = 8/227 (4%) Strand=Plus/Minus Query 118823 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 118882 ||| || || |||||||| |||||| | || || ||||| |||||| || | || Sbjct 1339348 GTTGCAAGCGTCCTTGTACAGCATGAAGGGACCACCAGTCTCAATTTGGGCCTCCAAGAT 1339289 Query 118883 AGCCTTCCAGA-CATCGGCAGCTGGCACAGTG--GCGTTGGCTCGCCCCTCTTCCTCGTA 118939 ||| | ||||| | || | ||| | ||| |||| || || ||||| | |||||| Sbjct 1339288 AGCGTACCAGAGCTTCTG-AGCCTCAATAGTCTTGCGT--GCACGGCCCTCCTTCTCGTA 1339232 Query 118940 CTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC-TGAGAGCCCTGGTGCCTTAT 118998 |||| |||||| | ||||| || |||||| | || ||| || || || |||| || Sbjct 1339231 CTTTTCGTAGAGTTCCTCAAATTCCTCACCCCAAACTTCATGA-AGACCAGGAGCCTCAT 1339173 Query 118999 CTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 119045 ||||||||||| ||||| |||||| | ||| || ||||||||| Sbjct 1339172 TCGGGCAGAAGAGCGACCACTGACCATTCGACTCGACGCGCTTCATG 1339126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432749450520