Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 134 2e-26 seq255 86.0 7e-12 seq58 82.4 9e-11 >seq1 Length=1832336 Score = 134 bits (148), Expect = 2e-26 Identities = 177/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| || |||||| | || | || || || | ||||| || || ||||| || Sbjct 896203 CTCTTCGACGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTGCGC 896144 Query 94774 TGGTTTG-ATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | ||| |||| || ||||| ||| |||| || || || || Sbjct 896143 TGGATCACAGACAAGAACTCGT-CCTTCGCCGAGCGTCTCGTCGCCTTCGCCGCCGTCGA 896085 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||||| || |||||| | |||| | |||||||||||||| || || || Sbjct 896084 GGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGCCTGAT 896025 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952 ||| |||||| ||||||||||||||| ||| ||||||||||| | ||| || || Sbjct 896024 GCCTGGTCTCACCTTCTCCAACGAGCTCATCAGCCGTGACGAGGGCATGCACACCGACTT 895965 Query 94953 TGC 94955 ||| Sbjct 895964 TGC 895962 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/229 (70%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAG 94788 || || |||||||| | | ||| ||||| |||||| | |||| | ||| | || | Sbjct 898083 ACTGTCCCGTGTATCAAGAGGAAGGCGGACTGGGCTCTCCGGTGGATATCTGACAAAAGG 898142 Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848 || ||||||| | | | || | || |||||| || || ||||| ||||||||| Sbjct 898143 ACG---TCCTTTGGGGTGAGGCTGGTGGCGTTTGCGGTCGTGGAAGGTATATTCTTCTCT 898199 Query 94849 GGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 || ||||| |||| | || | |||| | |||||||| || || |||||||| | || Sbjct 898200 GGGTCCTT-TGCGTCGATATTTTGGTTGAAGAAGCGTGGCCTTATGCCAGGCTTGACTTT 898258 Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 ||| ||||| || ||| ||| |||||||| | ||| || |||||| Sbjct 898259 CTCGAACGAACTCATCAGTCGAGACGAGGGCATGCACACCGACTTTGCG 898307 >seq255 Length=1613832 Score = 86.0 bits (94), Expect = 7e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 9758 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9817 || || ||||||||||| | || |||||||| |||||||| || || | | | || Sbjct 1414370 AACAGGTCCCGTACACGGGACGACCCAACACCAACGAACATCTCAACGAATTCAGAGCCG 1414311 Query 9818 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9877 || || ||||||||| || | || || || | ||| |||||| | ||||||| Sbjct 1414310 GAGACGGAGAAGAAGGGGACGTTTGCCTCGCCAGCGGTTGCTTTGGCGAGCAAAGTCTTA 1414251 Query 9878 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 || ||||| || || | ||||| |||||| || |||||||| ||||| Sbjct 1414250 CCAGTACCAGGAGGCCCAGAGAGGATGGCACCGCGAGGAATCTTTGCGCC 1414201 Score = 84.2 bits (92), Expect = 3e-11 Identities = 195/285 (68%), Gaps = 12/285 (4%) Strand=Plus/Minus Query 168277 ACCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGAA 168336 ||| |||||||||||||| | |||||| ||||| | ||| || | ||||| || | Sbjct 617585 ACCAGTACCGATACCCTCAGCACCGTTGACGAGGATCATAGGAATGACGGGCATATACCA 617526 Query 168337 GTCTGGCTCAATGGGGCGAC-CATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCG 168395 || || ||||| | | || ||| || | ||| ||||| || | ||||| || | | Sbjct 617525 CTCGGGTTCAAT-GTCCAACGTATCATCCTTCAAGTAGTTAAGGAGAGGATCGTCGCCAG 617467 Query 168396 GATCAAAGATCTTTCGGG-CATCTTTTGTGAGCTTTGTAAAGATATACCTCGTTTGAGAC 168454 ||| || | | |||| |||| | ||| || ||||||||||||| ||| Sbjct 617466 GATGGAACAGTGTACGGGCCATC-AACGACGGCTCGGTGAAGATATACCTCG---CAGAG 617411 Query 168455 GC---ATCCTTACCACCCATGA-GACGCGTACCAAACTGACCACACGGCTCAAGAAGATT 168510 || ||| ||||| ||| ||| ||| ||||| || |||||| |||| || | || Sbjct 617410 GCATGATCTTTACCGCCC-TGATCACGAGTACCGAATTGACCATTCGGCATGAGCAAGTT 617352 Query 168511 GATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGT 168555 ||| ||||| || |||||||| | |||||| ||||| || || Sbjct 617351 GATGTTGTTACTGCCGATGTAGTCTTGCGCCAAGTTGACGATGGT 617307 >seq58 Length=3253204 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/126 (75%), Gaps = 4/126 (3%) Strand=Plus/Plus Query 104610 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 104669 |||| |||||||||||||||||||| |||| | | |||||| |||| | ||| | Sbjct 1338945 TCGCCATCTATCTTGAGCCATGGCACTCGGACGTGTTCGAGTTCATTGACCTCCGTAAGA 1339004 Query 104670 ACCAAGGTGACGAGGAGG--CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 104727 |||| ||| | || |||| |||| | || || || |||| |||| | |||||||| || Sbjct 1339005 ACCATGGTAAGGAAGAGGTCCGCGCT--CGTGACCTTTTCTACGCTTTGTGGATTCCCGA 1339062 Query 104728 TCTCTT 104733 |||||| Sbjct 1339063 TCTCTT 1339068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258488829080