Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq165 132 1e-25 seq54 129 2e-24 seq313 109 2e-18 seq124 84.2 7e-11 >seq165 Length=362420 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| |||||||| || || |||||||| || || | || || |||||||||| Sbjct 206708 CAAGGTGAAGGGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAA 206649 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || ||||| ||||| || || || ||||| || || || ||||| |||| Sbjct 206648 GCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAA 206589 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || | || || ||||| |||||| | || || ||||| || | ||||| | Sbjct 206588 TCTTGCCCTTCACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGC 206529 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || || ||||| |||||||| Sbjct 206528 CGGTGAGAGTCTTGACAAAGATCTGCAT 206501 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | || || || |||||||||||||| || || || |||||||| Sbjct 207013 CATGCCTCCACGAAGACGAAGCACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATC 206954 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| ||||| ||||| ||||| ||||| || ||||| || Sbjct 206953 GGAGAGAGTACGACCGTCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGG 206894 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || || ||||| || | || ||| || || || || | || Sbjct 206893 AGGGATGCCCTCCTTGTCTTGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTC 206834 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| || | ||||| ||||| || || || || || |||||||| Sbjct 206833 GACTTCAAGGGTGATGGTCTTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Score = 113 bits (124), Expect = 1e-19 Identities = 152/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 || || || ||||||||||| || ||||| || ||||| || | || || |||||||| Sbjct 207217 ACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCG 207158 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648 || ||||| || |||||||| || || || || || ||||| || || || || ||||| Sbjct 207157 AGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGCC-TCCTTGTCCTGG 207099 Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 || || | || || || || || || | ||||||||||| || | ||||| Sbjct 207098 ATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCTTG 207040 Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || || ||||| |||||||| Sbjct 207039 CCGGTGAGAGTCTTGACAAAGATCTGCAT 207011 >seq54 Length=1324731 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || ||||||||||| || ||||| || ||||| || || || Sbjct 967828 CATACCTCCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTC 967769 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || || ||||| ||||| ||||| ||||| || || Sbjct 967768 AGAAAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGG 967709 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || ||||| || || | || || || || || ||||| | || Sbjct 967708 AGGGATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTC 967649 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| | || || || || |||||||| Sbjct 967648 GACCTCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 123 bits (136), Expect = 8e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || || ||||||||||| || || || ||||| || || Sbjct 967316 CATACCTCCACGAAGACGGAGGACGAGGTGAAGAGTAGATTCCTTCTGGATATTGTAGTC 967257 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || || || ||||| ||||| || || Sbjct 967256 GGAGAGGGTCCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGG 967197 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || |||||||| || |||| || || || || ||||| | || Sbjct 967196 AGGAATACCCTCCTTGTCCTGAATCTTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTC 967137 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | |||||||| || | || || ||||| |||||||| Sbjct 967136 AACCTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 967086 Score = 118 bits (130), Expect = 3e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 ||||||||||||| ||||| || || || || || || || || || || ||||| || | Sbjct 967521 CAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGA 967462 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || ||||| ||||| ||||| || ||||| || || || |||||||| | Sbjct 967461 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGA 967402 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || | || || || || || ||||| | || || ||||| || | ||||| | Sbjct 967401 TCTTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGC 967342 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| | || || || || |||||||| Sbjct 967341 CGGTCAAAGTCTTGACGAAGATCTGCAT 967314 >seq313 Length=2003938 Score = 109 bits (120), Expect = 2e-18 Identities = 199/291 (68%), Gaps = 8/291 (3%) Strand=Plus/Minus Query 349604 ACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAA 349663 ||| ||| | || | | ||| || ||||| || || ||| |||||||| || || || Sbjct 907007 ACTCATGATATTTTCAGTGTCCCTGCCTACTTCAACGATTCCCAGCGTCTGGCTACCAAG 906948 Query 349664 GATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCA 349723 |||||||| || || || | | ||||| | || || || || ||||||||||| Sbjct 906947 GATGCTGGTTCTATCGCTGGACTCGAGGTTCTCCGTATCATCAACGAGCCCACTGCTGCT 906888 Query 349724 GCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGAT 349783 || ||||| || || ||||| | | || ||| || || | |||| || || ||| Sbjct 906887 GCTATTGCCTACGGTCTTGACTCCAAGTCTGCCCAGGAGAAGCACGTTCTCATCTTCGAT 906828 Query 349784 TTAGGTGGTGGTACTTTTGATGTATCACTACT----AACACTTGAAGAGGGAATTTTTGA 349839 || ||||| || ||||| ||||| || || || | |||| | || | || | Sbjct 906827 TTGGGTGGAGGAACTTTCGATGTCTCCCTGCTTAGCATCACT----GGTGGTGTCTTCGC 906772 Query 349840 AGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 || || || ||||||||||| || ||||||||||| || || || || || Sbjct 906771 CGTCAAGGCCACTGCTGGTGACACCCATCTTGGTGGCGAGGACTTCGACAA 906721 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 349232 TGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGA 349291 ||||| | |||||||||||| || ||||| ||||| || || || || || |||||| || Sbjct 1837165 TGTGTCGGTGTTTGGCAAAACGACCGTGTCGAAATCATCGCCAACGACCAGGGTAACCGA 1837106 Query 349292 ACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAA 349351 ||||| || || || || | || | || || |||||| |||| |||||| | || || Sbjct 1837105 ACAACACCCTCGTATGTGTCCTTCTCGGACACCGAGCGTTTGATCGGTGATGCCGCGAAG 1837046 Query 349352 AATCA 349356 || || Sbjct 1837045 AACCA 1837041 >seq124 Length=638099 Score = 84.2 bits (92), Expect = 7e-11 Identities = 81/103 (79%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| |||||||||||||| || ||||| || || || | || || ||||| || | Sbjct 263063 CAAG-TGAAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCATCCTCGA 263121 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAAT 140632 | || |||||||||||||| |||||||| || || |||||||| Sbjct 263122 GCTGCTTTCCAGCAAAGATGAGACGTTGTTGGTCCGGAGGAAT 263164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515248245699551