Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 132 5e-26 seq58 95.1 1e-14 >seq1 Length=1832336 Score = 132 bits (146), Expect = 5e-26 Identities = 400/607 (66%), Gaps = 18/607 (3%) Strand=Plus/Plus Query 74726 CCTCAGGTGAGAGTAAAGC-GTCACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTA 74784 ||| ||||| ||| | || | || |||||| || ||| ||| || || | ||| | Sbjct 895937 CCTGAGGTGGGAGAAGAGGAGGCA-GGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGA 895995 Query 74785 TCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGG 74844 | | || || || || | || |||||||| || ||||||||||| | ||| ||||| | Sbjct 895996 TGAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAG 896055 Query 74845 CACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCG 74904 |||||| || ||||||||| || ||||| || |||||||| || || | | Sbjct 896056 AGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGG 896115 Query 74905 CGAACG----GTGCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACC 74960 |||| | || | | | || ||||| | | ||||| || || || |||| Sbjct 896116 CGAAGGACGAGTTCTT-GTCTGTGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGAT- 896173 Query 74961 GCAGGG-ACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAG 75019 |||||| | || ||||| || | ||||||| | | || | ||| ||||||| | Sbjct 896174 GCAGGGGATGGTCTCGATGGCGTCGAAGAGGTATTCGCGCTGCTTGGGGTCCTTGATGTA 896233 Query 75020 CTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGC 75079 |||| || | || ||||| ||||| || || || ||| | | |||| | | Sbjct 896234 GGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACC 896293 Query 75080 GTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTC 75139 |||||| | |||||||| || ||| || || || || || | | ||| ||||| Sbjct 896294 GTAGAAGCAACGCGCCTCGGCGGCCTGCACCTCGTTGGAGAATCGCTCGACGAGGTTCTC 896353 Query 75140 CATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTC 75199 ||||||| ||||| ||||| ||||| || || || || ||| ||||||||||| Sbjct 896354 GTTGACGATACCGTCGGAGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTC 896413 Query 75200 ATCGTCAGTGAG---TTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGAC 75256 | ||| |||| || ||||| || | | ||||| | | || |||||||| | Sbjct 896414 GTTGTCGTTGAGCTTCTTCTCCCAGTCGTGCTGGTCCTTGGAGAGGTCCATCTCCTCTGC 896473 Query 75257 CGTCCAGAA--ACTCCCAATC-GCCTTTTTGTACAAAGACCACAAGTCAGGGTAATTGAT 75313 |||||||| | || || ||||| ||||||| ||| | ||| |||| | ||| Sbjct 896474 TGTCCAGAAGGAGGCC---TCGGCCTTCTTGTACATTTGCCAGATCTCATGGTATTGGAT 896530 Query 75314 TGGAAAT 75320 || ||| Sbjct 896531 AGGGAAT 896537 Score = 95.1 bits (104), Expect = 1e-14 Identities = 273/415 (66%), Gaps = 5/415 (1%) Strand=Plus/Minus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| || |||| || || | ||| ||||| || | | ||| |||||||| |||||||| Sbjct 898289 GCCCTCGTCTCGACTGATGAGTTCGTTCGAGAAAGTCAAGCCTGGCATAAGGCCACGCTT 898230 Query 74828 CTTCAACCAAAAGAT-GGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAA 74886 |||||||||||| || | | || ||||| ||| |||||| || ||||| || ||||| Sbjct 898229 CTTCAACCAAAATATCGACGCA-AAGGACCCAGAGAAGAATATACCTTCCACGACCGCAA 898171 Query 74887 AGGCGACAAGGCGTTGCGCGAACG--GTGC-ATCGGAAGTCATCCAAGTCTGAGCCCATT 74943 | || || || | | | || | || | | | || ||||| ||||||| | Sbjct 898170 ACGCCACCAGCCTCACCCCAAAGGACGTCCTTTTGTCAGATATCCACCGGAGAGCCCAGT 898111 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTT 75003 | || || | |||| |||||||| || ||||| || | || ||| Sbjct 898110 CCGCCTTCCTCTTGATACACGGGACAGTCTCAATCGCAGCAAACAAATACTCCCGCTCCC 898051 Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063 || ||||||| ||||||| | | || |||||||| || || | ||| Sbjct 898050 GTGGGTCCTTGATATAGGTGTCAATGAGCAACGAATACGTCTCGGAGTGCACGTTCTCCA 897991 Query 75064 TGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAAT 75123 | | |||| || |||||||| | |||||||| || | || || || || || || Sbjct 897990 TCATGATCTGGAACCCGTAGAAACAGCGCGCCTCGGCGACTTGGACGTCGTTGGAGAACC 897931 Query 75124 TCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 | | ||| || || | ||||||||||| ||||||||||| || || || || Sbjct 897930 GCTCGACGAGGTTTTCGTTCACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGCAC 897876 >seq58 Length=3253204 Score = 95.1 bits (104), Expect = 1e-14 Identities = 307/465 (66%), Gaps = 39/465 (8%) Strand=Plus/Plus Query 55139 AACCTGAACCGGGTCATCGACAAGAATTACTACCCGA---CTGAAGCGGCGCGCAAGTCC 55195 ||||| ||||| |||||||| || |||||||| | ||||||| ||| || Sbjct 1339587 AACCTCAACCGCATCATCGACGTCAACTACTACCCCATCCCTGAAGCACGTCGC---TCG 1339643 Query 55196 AACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATG 55255 ||| | || ||||| ||||||| ||||||| || || | || || |||||| Sbjct 1339644 AACATGCGTCACCGCCCCATCGGTGTCGGTGTGCAAGGTCTCGCGGATGCTTTCATGGCT 1339703 Query 55256 CTCGGATTGCCCTTCGACTCG---GAACCTGCTCGAGAAATTAACCAGGACATCTTC-AG 55311 || | |||||||||||||| ||| || || | |||||||| | |||||| || Sbjct 1339704 CTGCGCATGCCCTTCGACTCGCCTGAA---GCACGCGTCCTTAACCAGCAGATCTTCGAG 1339760 Query 55312 TCGCATCTACTTTGCAGCGCTCGAGG--AGTCGTGTCATCTGGCTATGAGCGAGGGGACC 55369 | ||||||| ||||| | |||| ||| | | || ||||| || ||| ||| || Sbjct 1339761 AC-CATCTACCACGCAGCCGTTGAGGCCAGTAGCGACA--TGGCTGAGATCGATGGGCCC 1339817 Query 55370 TACGAGACGTTC-CGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGG- 55427 |||||||||| | | || | || || |||||| | || |||| ||| | |||| Sbjct 1339818 TACGAGACGTACGAGGGAAGC-CCTGCAAGCAAGGGTCAGCTTCAGTACGACTTGTGGGG 1339876 Query 55428 -GCAA----GTCTGACCCCATG---TTTGACAAGTTGAAGCA-----TGACATTCACTTG 55474 | || || |||| | | | | | | | ||| | || | |||| Sbjct 1339877 TGTAACTCCTTCCGACCTCTGGGACTGGGCCTCGCTCAAGGAGAAGGTGGCGCGCACT-- 1339934 Query 55475 TGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATC 55534 || || | |||||||| ||| | || || ||||| ||||| || ||| |||||| Sbjct 1339935 ---GGTCTCAGGAACTCCCTTCTCCTTGCTCCCATGCCTACCGCCTCTACGAGCCAGATC 1339991 Query 55535 ATGGGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579 | || |||||||| |||||||| ||||| | |||||||||| Sbjct 1339992 CTCGGTAACAACGAATGTTTCGAGCCTTACACCAGCAACATCTAC 1340036 Score = 93.3 bits (102), Expect = 5e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530 || |||||||| || | | || || ||||| |||||||| | | | | || || Sbjct 1338845 GGTACGAACGGTTTCTCGAACGGTATTGTGCCCATGCTCCGTGCATACGATGCAACTGCT 1338904 Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590 || ||||| |||| || || ||||| || | ||||||||||| || ||||| Sbjct 1338905 CGTTACGTTGACCAAGGAGGCAACAAGCGACCCGGTGCCTTCGCCATCTATCTTGAGCCA 1338964 Query 53591 TGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650 |||||| | ||| | | ||||| | || || ||| ||| || ||| | |||||| | Sbjct 1338965 TGGCACTCGGACGTGTTCGAGTTCATTGACCTCCGTAAGAACCATGGTAAGGAAGAGGTC 1339024 Query 53651 CGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTT 53694 ||| |||||||| || ||| ||| |||||||||| || ||||| Sbjct 1339025 CGCGCTCGTGACCTTTTCTAC-GCTTTGTGGATTCCCGATCTCTT 1339068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213831656600