Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq54 185 1e-41 seq165 174 2e-38 seq1 96.9 4e-15 seq257 84.2 2e-11 seq308 82.4 9e-11 seq58 82.4 9e-11 >seq54 Length=1324731 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || || ||||| || ||||| ||||||||||| | Sbjct 967086 ATGCAGATCTTTGTCAAGACCTTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCT 967145 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||| | | || | || ||||||||||||||||| |||||||| |||||| Sbjct 967146 GACTCCATCGAGGCCGTCAAAGGCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 967205 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| || || ||||| |||||||| | ||| ||||| | ||||| ||| Sbjct 967206 CAGCGTCTTATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGGACCCTCTCCGACTACAAT 967265 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| |||||||| || ||| | |||||||| || || Sbjct 967266 ATCCAGAAGGAATCTACTCTTCACCTCGTCCTCCGTCTTCGTGGAGG 967312 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||| |||||||| || || ||||| ||||| | Sbjct 967598 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACTATCACGCTCGAGGTCGAGTCTTCT 967657 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||| | |||||| || || |||||||||||||| || ||||| |||||| Sbjct 967658 GACTCCATCGAGGCCGTGAAGGGAAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 967717 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| |||||||||| ||||| || | ||||| || Sbjct 967718 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACTCTTTCTGACTACAAC 967777 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| |||||||| ||| | ||||| || || || Sbjct 967778 ATTCAGAAGGAGTCCACCCTTCATCTTGTCCTCCGTCTCCGTGGAGG 967824 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||||||||| || || |||||||| ||||| Sbjct 967826 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCC 967885 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||| | | |||| ||| ||||||||||||||||| || ||||| |||||| Sbjct 967886 GACTCCATCGAGGCCGTCAAGGGTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 967945 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || ||||| ||||| |||||||||| ||| || || | || || || Sbjct 967946 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCTGATTACAAC 968005 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || || ||||| || || | ||||| || ||||| || Sbjct 968006 ATCCAGAAGGAGTCTACCCTTCACCTTGTTCTTCGTCTCCGTGGTGGTCA 968055 Score = 150 bits (166), Expect = 2e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||||||||| || || |||||||| ||||| | Sbjct 967314 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCT 967373 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | | |||| || || ||||| |||||||| || ||||| |||||| Sbjct 967374 GACTCTATCGAGGCCGTCAAGGGCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAG 967433 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||||| ||||||| | | ||||| || Sbjct 967434 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGTCCGACTACAAC 967493 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || ||||||||||| Sbjct 967494 ATCCAGAAGGAGTCGACTCTTCATCT 967519 >seq165 Length=362420 Score = 174 bits (192), Expect = 2e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || |||||||||||||| || |||||||| ||||| | Sbjct 206501 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACTATCACCCTTGAGGTCGAGTCTTCT 206560 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||||| |||| |||||| || ||||| || |||||||| || ||||| ||||| Sbjct 206561 GATAGTATTGAGGCGGTGAAGGGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGACCAA 206620 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || || |||| |||||||| | ||||||||| Sbjct 206621 CAGCGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGTACCCTTTCCGACTATAAT 206680 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || || ||||| || Sbjct 206681 ATCCAGAAGGAGTCTACCCTTCACCT 206706 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| ||||||||||| || || ||||| || ||||| Sbjct 206783 ATGCAGATCTTCGTTAAGACGCTCACCGGCAAGACCATCACCCTTGAAGTCGAGTCCTCC 206842 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || || | | | |||| || ||||| ||||||||||| || ||||| || || Sbjct 206843 GACAGTATCGAGGCTGTTAAGGGAAAGATTCAAGACAAGGAGGGCATCCCTCCCGATCAA 206902 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| || || || ||||| | |||||| || | || ||||| Sbjct 206903 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGACGGTCGTACTCTCTCCGATTATAAC 206962 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| || || | |||||||| || || Sbjct 206963 ATCCAGAAGGAGTCTACTCTTCACCTCGTGCTTCGTCTTCGTGGAGG 207009 Score = 138 bits (152), Expect = 1e-27 Identities = 169/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || ||||||||||| | ||| ||||| |||||||| Sbjct 207011 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCA-TACCCTTGAAGTTGAGTCCTCC 207069 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || || | |||||| || || ||||||||||| || || ||||| ||||| Sbjct 207070 GACAGTATCGAGGCCGTGAAGGGCAAGATCCAGGACAAGGA-GGCATCCCTCCGGACCAA 207128 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || || || ||||| |||| |||||||| | || || || Sbjct 207129 CAGCGCCTGATCTTTGCCGGCAAACAGCTCGAAGATGGACGTACCCTTTCCGATTACAAC 207188 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| || || || ||||||| || || || Sbjct 207189 ATTCAGAAGGAGTCTACTCTCCACCTGGT-GTGCGTCTCCGTGGAGG 207234 Score = 132 bits (146), Expect = 5e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||||||||| || ||||| ||||| || ||||| ||||| | Sbjct 207236 ATGCAAATATTCGTGAAGACGCTTACGGGAAAGACAATTACCCTCGAGGTCGAGTCTTCT 207295 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || || | | | || | || || |||||||||||||| |||||||| || || Sbjct 207296 GACAGTATCGAGGCTGTCAAAGGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 207355 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || ||||| || ||||||| || || || | || || || Sbjct 207356 CAGCGCTTGATCTTCGCGGGCAAGCAGCTGGAGGATGGACGCACGTTATCGGATTACAAC 207415 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| |||||||| || |||||||| Sbjct 207416 ATCCAGAAGGAATCGACGCTTCATCT 207441 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 ||||| || ||||||||||| || || || || || |||||||| ||||||| || ||| Sbjct 206378 ATTCCCCCCGACCAGCAGCGCCTCATCTTCGCCGGAAAGCAACTTGAGGATGGGCGCACC 206437 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | || || || | || ||||| ||||||||||| || || ||||||| || || Sbjct 206438 CTCTCCGATTACAACATTCAGAAGGAGTCCACTCTTCACCTTGTTCTGCGTCTCCGTGGA 206497 Query 27631 GG 27632 || Sbjct 206498 GG 206499 >seq1 Length=1832336 Score = 96.9 bits (106), Expect = 4e-15 Identities = 307/465 (66%), Gaps = 12/465 (3%) Strand=Plus/Minus Query 64702 TCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGG 64761 ||||| || | ||||||||| || || ||| || || || || ||||| || || Sbjct 896125 TCGTCCTTCGCCGAGCGTCTCGTCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGC 896066 Query 64762 TCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCG 64821 || ||| ||||| |||||||| || ||||| ||||||||||| ||||| | || || Sbjct 896065 TCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCC 896006 Query 64822 AACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGC 64881 |||||||| ||| || |||||||| | ||| || ||||| ||| ||| | Sbjct 896005 AACGAGCTCATCAGCCGTGACGAGGGCATGCACACCGACTTTGCCTGCCTCCTCTTCTCC 895946 Query 64882 CACCTCAAGGACAAACCATCACATGG--GAC-TATAATTGAT-ATAGTAAAATCGGCTGT 64937 ||||||| | | || |||| | | | | ||| || || | ||| || Sbjct 895945 CACCTCAGGCGCCGTCC-TCACCCCGACGTCGTCCGCCAGATCATCGTCGA---GGCCGT 895890 Query 64938 AGAAATTGAAAAGGAATTCATTACTGCCGCGCT-TCCGTGTCGTCTCATCGGCATGGATG 64996 | || || |||| ||| | || | |||||| |||| || ||||||||||||| | | Sbjct 895889 CGCCATCGAGCAGGAGTTCCTGACGGACGCGCTCCCCGTCTC-TCTCATCGGCATGAACG 895831 Query 64997 CCGATAAGATGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCT-TACTCAGTTTGGT 65055 | | |||| ||||| ||||| || || || || || ||||| | | | | ||||| Sbjct 895830 CGAAGTTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGTCTGCTGTGCGC-GCTTGGT 895772 Query 65056 ATTAAGCCCTACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAG 65115 | || ||| || || | || || || || | ||||| | |||| || || Sbjct 895771 AACGAGAGGCACTACAACTCGACGAACCCCTTCGATTTCATGGATATGATCTCGCTCCAG 895712 Query 65116 GGGAAGACTAACTTTTTTGAAAAGAGGGTAGGTGATTACTCAAAG 65160 || ||||| ||||| || || ||| | || || ||||| ||| Sbjct 895711 GGCAAGACCAACTTCTTCGAGAAGCGTGTTTCGGACTACTCCAAG 895667 Score = 95.1 bits (104), Expect = 1e-14 Identities = 208/306 (68%), Gaps = 13/306 (4%) Strand=Plus/Plus Query 64569 CGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACT 64628 ||||||||||||| | | ||||||| | | | ||| || ||| ||| | Sbjct 898007 CGAGACGTATTCGTTGCTCATTGACACCTATATCAAGGACCCACGGGAGCGGGAGTATTT 898066 Query 64629 GTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAA--AAGGCTGAATGGGCCATCCGG 64686 ||| || || |||||||| |||| ||| | | | ||||| || ||||| ||||| Sbjct 898067 GTTTGCTGCGATTGAGACTGT-CCCG-TGTATCAAGAGGAAGGCGGACTGGGCTCTCCGG 898124 Query 64687 TGGATGAATCGTG------GGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTG 64740 ||||| ||| || || |||| ||||| | | || | || ||||| ||| Sbjct 898125 TGGAT--ATC-TGACAAAAGGACGTCCTTTGGGGTGAGGCTGGTGGCGTTTGCGGTCGTG 898181 Query 64741 GAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTG 64800 ||||| || ||||| |||||||| || || || || ||| | || ||||| ||||| Sbjct 898182 GAAGGTATATTCTTCTCTGGGTCCTTTGCGTCGATATTTTGGTTGAAGAAGCGTGGCCTT 898241 Query 64801 ATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAA 64860 |||||||| || | || |||||||| || ||| ||| |||||||| | ||| || Sbjct 898242 ATGCCAGGCTTGACTTTCTCGAACGAACTCATCAGTCGAGACGAGGGCATGCACACCGAC 898301 Query 64861 TTTGCG 64866 |||||| Sbjct 898302 TTTGCG 898307 >seq257 Length=1005854 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || ||||| |||||||||||||| || || || || ||||| |||||||||| || ||| Sbjct 387403 ATCCCTCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACC 387462 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 | ||| ||||| || |||| ||||| ||||| || || | || | ||||| || || Sbjct 387463 TTGAGC-GACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTGCGTGG 387521 Query 27630 TGG 27632 ||| Sbjct 387522 TGG 387524 >seq308 Length=3227615 Score = 82.4 bits (90), Expect = 9e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 24743 TGAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCG 24802 |||| ||| |||||||| |||||||| ||| ||||| |||||||| || || || Sbjct 1615929 TGAGCTGTACGGCAAGGTCGTTGAGACGCCTCAGAGCGAGACGACTCCATTCTACCCTCG 1615870 Query 24803 AAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGC 24862 || || || ||| | || | | | |||||||| || ||||| || || || Sbjct 1615869 TTCGCCCTACGGTGTCGCCAAACTCTACAGCTACTGGATCACGGTCAACTATCGCGAAGC 1615810 Query 24863 CCATGGGATATATGCATGCAACGGAATTCTGTTCAACCATGAG 24905 |||| || |||||||| ||||| ||||||||||| || ||| Sbjct 1615809 ATATGGCATGTATGCATGTAACGGCATTCTGTTCAATCACGAG 1615767 >seq58 Length=3253204 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 81621 GCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATA 81680 |||||| ||||| || || || | ||| ||| |||| ||||| | ||||| || | || Sbjct 1338631 GCCGGCGTTGAAGAGGGTAGGTGACGCATGAGTGAAGTAACGCTCGGACATGAGATTGTA 1338572 Query 81681 GGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACAT 81740 ||| || || | || ||| |||| ||| ||||||||||| |||||||| | ||| Sbjct 1338571 GGTCTCAATGGCACGGTCAATGTCGTTCTTGTGGATACCGATAGCGACACGCATGAGCAT 1338512 Query 81741 GTACTGGGGCGTCTC 81755 || ||| ||| |||| Sbjct 1338511 GTGCTGTGGCCTCTC 1338497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308140145040