Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq165 114 8e-21 seq54 84.2 1e-11 >seq165 Length=362420 Score = 114 bits (126), Expect = 8e-21 Identities = 159/219 (73%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| |||||||| |||||| |||||||| ||||| ||||| || || Sbjct 207225 AGACGCA-CACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGT 207167 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || ||||| |||||||| || | |||||||||||||| || | | ||||| Sbjct 207166 CCATCTTCGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGA-TGCCTCC 207108 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| |||||| || | | || |||| | ||| |||| || || | Sbjct 207107 TTGTCCTGGATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTT-CAAGGGT 207049 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| | || || ||||| ||||||||| Sbjct 207048 ATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCATG 207010 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | ||| | || ||||| |||||| || ||||||||||| || Sbjct 207010 GCCTCCACGAAGACGAAGCACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGGA 206951 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| ||||| ||||| || || || || | ||||||||| || || || Sbjct 206950 GAGAGTACGACCGTCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGG 206891 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||||| || | | || |||| | ||| || Sbjct 206890 GATGCCCTCCTTGTCTTGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGAC 206831 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || || || ||||| | ||| || || || |||||||| Sbjct 206830 TTCAAGGGTGATGGTCTTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 >seq54 Length=1324731 Score = 84.2 bits (92), Expect = 1e-11 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 34484 CTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTG 34543 ||||| |||| | || | ||||||||||||||||| || ||||| || || || |||| Sbjct 967016 CTCTACGACGTACCA--AGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGTG 966959 Query 34544 TTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | || |||| ||||| || || || || || || |||||||| ||||| || || Sbjct 966958 TGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGGGG 966904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728384061861