Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq165 131 1e-25 seq54 122 8e-23 >seq165 Length=362420 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | || || |||||||| || | ||| Sbjct 206783 ATGCAGATCTTCGTTAAGACGCTCACCGGCAAGACCATCACCCTTGAAGTCGAGTCCTCC 206842 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| || ||| || || ||| ||||||||||| || ||||| || ||||||||| Sbjct 206843 GACAGTATCGAGGCTGTTAAGGGAAAGATTCAAGACAAGGAGGGCATCCCTCCCGATCAA 206902 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| |||||||| | || ||| || || | |||||||| ||| Sbjct 206903 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGACGGTCGTACTCTCTCCGATTATAAC 206962 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || | || | ||| | || || ||||| Sbjct 206963 ATCCAGAAGGAGTCTACTCTTCACCTCGTGCTTCGTCTTCGTGGAGGCAT 207012 Score = 127 bits (140), Expect = 2e-24 Identities = 169/231 (73%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||||| ||||||||| | || || |||||||| || | || Sbjct 207010 CATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCAT-ACCCTTGAAGTTGAGTCCTC 207068 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| || ||| || || || || || ||||| || ||||| || || || || Sbjct 207069 CGACAGTATCGAGGCCGTGAAGGGCAAGATCCAGGACAAGGA-GGCATCCCTCCGGACCA 207127 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||||||||||| | ||||| | ||| ||||||||||||| Sbjct 207128 ACAGCGCCTGATCTTTGCCGGCAAACAGCTCGAAGATGGACGTACCCTTTCCGATTACAA 207187 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||| || | || ||| | ||||| | || || ||||| Sbjct 207188 CATTCAGAAGGAGTCTACTCTCCACCTGG-TGTGCGTCTCCGTGGAGGCAT 207237 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| ||||| || || || || || || ||| | ||||| || || || || | || Sbjct 207235 CATGCAAATATTCGTGAAGACGCTTACGGGAAAGACAATTACCCTCGAGGTCGAGTCTTC 207294 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| || ||| |||||| || || || ||||| || || || || |||||||| Sbjct 207295 TGACAGTATCGAGGCTGTCAAAGGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCA 207354 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACA 27165 |||||| || || | ||| ||||| || |||| || | || |||| || ||||||| Sbjct 207355 ACAGCGCTTGATCTTCGCGGGCAAGCAGCTGGAGGA-TGGACGCACGTTATCGGATTACA 207413 Query 27166 ACATTCAAAAGGAGTCGAC 27184 |||| || ||||| ||||| Sbjct 207414 ACATCCAGAAGGAATCGAC 207432 >seq54 Length=1324731 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || ||||| || || | ||| Sbjct 967826 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCC 967885 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| || ||| ||||| || ||||| ||||| || ||||| || || || || Sbjct 967886 GACTCCATCGAGGCCGTCAAGGGTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 967945 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| || | || || || || |||| ||||||||| Sbjct 967946 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCTGATTACAAC 968005 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| ||| | || | ||| | ||| | || ||||| Sbjct 968006 ATCCAGAAGGAGTCTACCCTTCACCTTGTTCTTCGTCTCCGTGGTGG 968052 Score = 118 bits (130), Expect = 9e-22 Identities = 153/210 (73%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| ||||||||||| | || || ||||| || || | || Sbjct 967314 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCT 967373 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| || ||| ||||| || || || || || || ||||| || ||||| || Sbjct 967374 GACTCTATCGAGGCCGTCAAGGGCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAG 967433 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || | || || || ||| | ||||| |||||| Sbjct 967434 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACCTTGTCCGACTACAAC 967493 Query 27168 ATTCAAAAGGAGTCGACCTTACAT-TTGGT 27196 || || ||||||||||| | ||| ||||| Sbjct 967494 ATCCAGAAGGAGTCGACTCTTCATCTTGGT 967523 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||| ||| |||| || || || || || | || Sbjct 967598 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACTATCACGCTCGAGGTCGAGTCTTCT 967657 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||||| || ||| || || ||| || || ||||| || ||||| || ||||| || Sbjct 967658 GACTCCATCGAGGCCGTGAAGGGAAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 967717 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || || | || |||| || |||||| Sbjct 967718 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACTCTTTCTGACTACAAC 967777 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | ||| | || | ||| | || || || || Sbjct 967778 ATTCAGAAGGAGTCCACCCTTCATCTTGTCCTCCGTCTCCGTGGAGGTAT 967827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916676635840