Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq296 114 1e-20 seq215 114 1e-20 >seq296 Length=2232338 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 6850 CTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCC 6909 || |||||| ||| | |||| ||||| ||| ||| || | || ||||| ||| || Sbjct 1744277 CTTCAGCTGATCCACGCCCTCTCCCGTATAATCCTTGTCACAATCCTCATACTTCGCACC 1744336 Query 6910 AAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAA 6969 ||| ||||||||||| ||||| || || || |||||||| ||||| | | || Sbjct 1744337 AAAATGTCTCCACTGAAACCCATACACAGGTCCCAAGTCTCCCTCTCGTCTATGACTCAA 1744396 Query 6970 CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGA 7029 ||| |||||||||| ||| || | ||| || | | |||||||||||||| ||| | Sbjct 1744397 CCCTCGCTTGTCCAAAAACTCCCTAGAGCCATTTCCATCCCAGATCTTCACGCCCTTGTC 1744456 Query 7030 CGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGA 7082 ||| || ||| | | ||| || || || || |||||||| || || |||| Sbjct 1744457 CGACAGAAGCTTAGAATCCGTCGCACCTCTAACAAACCACAGAAGTTCTTCGA 1744509 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 34263 TCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGG 34322 |||| || || |||||||| || || || || ||| | | ||| || ||| | || Sbjct 1744509 TCGAAGAACTTCTGTGGTTTGTTAGAGGTGCGACGGATTCTAAGCTTCTGTCGGACAAGG 1744450 Query 34323 GGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCAT 34382 | |||||||||||||| | | || ||| | || ||| |||||||||| ||||| Sbjct 1744449 GCGTGAAGATCTGGGATGGAAATGGCTCTAGGGAGTTTTTGGACAAGCGAGGGTTGAGTC 1744390 Query 34383 CTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGG 34442 | | ||||| |||||||| || || || ||||| ||||||||||| ||||| ||| Sbjct 1744389 ATAGACGAGAGGGAGACTTGGGACCTGTGTATGGGTTTCAGTGGAGACATTTTGGTGCGA 1744330 Query 34443 AGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAG 34495 ||||| || | || ||| ||| ||||| |||| | ||| |||||| || Sbjct 1744329 AGTATGAGGATTGTGACAAGGATTATACGGGAGAGGGCGTGGATCAGCTGAAG 1744277 >seq215 Length=105717 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 34263 TCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGG 34322 |||| ||||| || ||||| || || || | ||| || | ||| || || || || Sbjct 68747 TCGAAGAGCTCCTATGGTTTGTCAGAGGTACAACGGACTCTAAGCTTCTATCTGCCAAGG 68806 Query 34323 GGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCAT 34382 | |||||||||||||| | | || ||| | || ||| |||||||||| ||||| Sbjct 68807 GCGTGAAGATCTGGGATGGAAATGGCTCTAGGGAGTTTTTGGACAAGCGAGGGTTGAGTC 68866 Query 34383 CTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGG 34442 | | ||||| |||||||| || || || ||||| ||||||||||| ||||| ||| Sbjct 68867 ATAGACGAGAGGGAGACTTGGGACCTGTGTATGGGTTTCAGTGGAGACATTTTGGTGCGA 68926 Query 34443 AGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAG 34495 ||||| || | || ||| ||| ||||| |||| | ||| |||||| || Sbjct 68927 AGTATGAGGATTGTGACAAGGATTATACGGGAGAGGGCGTGGATCAGCTGAAG 68979 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 6850 CTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCC 6909 || |||||| ||| | |||| ||||| ||| ||| || | || ||||| ||| || Sbjct 68979 CTTCAGCTGATCCACGCCCTCTCCCGTATAATCCTTGTCACAATCCTCATACTTCGCACC 68920 Query 6910 AAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAA 6969 ||| ||||||||||| ||||| || || || |||||||| ||||| | | || Sbjct 68919 AAAATGTCTCCACTGAAACCCATACACAGGTCCCAAGTCTCCCTCTCGTCTATGACTCAA 68860 Query 6970 CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGA 7029 ||| |||||||||| ||| || | ||| || | | |||||||||||||| ||| || Sbjct 68859 CCCTCGCTTGTCCAAAAACTCCCTAGAGCCATTTCCATCCCAGATCTTCACGCCCTTGGC 68800 Query 7030 CGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGA 7082 || || ||| | || ||| | || || || ||||| || ||||| |||| Sbjct 68799 AGATAGAAGCTTAGAGTCCGTTGTACCTCTGACAAACCATAGGAGCTCTTCGA 68747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260623760240