Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq165 89.7 4e-13 >seq165 Length=362420 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || |||||||| |||| ||| || ||| | || |||||||| ||||| || || Sbjct 206692 CTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCGGCGAA 206633 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||||||||| ||||||| || | || ||| || || || || || | || Sbjct 206632 GATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTCACCGC 206573 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | |||| ||||| || || | |||||| | || || || || || || || Sbjct 206572 CTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTCTTGAC 206513 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 206512 AAAGATCTGCAT 206501 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || |||||||||| || || || |||| |||||||||||||| || || Sbjct 206974 CTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTCCTCAAGCTGTTTGCCAGCGAA 206915 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGAT-TTTCTGTT-TGAGC 39210 || |||||||| || |||| || | || ||| ||||| || |||| || ||| Sbjct 206914 GATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCTTGAATCTTTCCCTTAACAGC 206855 Query 39211 GTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 ||| || | ||| ||||| || || | ||||| | || || || ||||| ||| Sbjct 206854 CTCGATAC--TGTCGGAGGACTCGACTTCAAGGGTGATGGTCTTGCCGGTGAGCGTCTTA 206797 Query 39271 ACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 206796 ACGAAGATCTGCAT 206783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543940477421