Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq165 104 2e-17 >seq165 Length=362420 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||| || ||||| || || || ||||| || ||||| || ||| | Sbjct 206783 ATGCAGATCTTCGTTAAGACGCTCACCGGCAAGACCATCACCCTTGAAGTCGAGTCCTCC 206842 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| | | || | || ||| ||| ||||| || || | || || |||||| Sbjct 206843 GACAGTATCGAGGCTGTTAAGGGAAAGATTCAAGACAAGGAGGGCATCCCTCCCGATCAA 206902 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || |||||||| || || |||| || ||| | |||||| ||| Sbjct 206903 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGACGGTCGTACTCTCTCCGATTATAAC 206962 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 206963 ATCCAGAAGGAGTCTAC 206979 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || || |||||||| || || || ||||| || || || | Sbjct 207236 ATGCAAATATTCGTGAAGACGCTTACGGGAAAGACAATTACCCTCGAGGTCGAGTCTTCT 207295 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| | | || | ||| || || ||||| || ||| | || || |||||| Sbjct 207296 GACAGTATCGAGGCTGTCAAAGGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 207355 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || || || ||||| || ||||| || | |||||| ||| ||||||||| Sbjct 207356 CAGCGCTTGATCTTCGCGGGCAAGCAGCTGGAGGATGGACGCACGTTATCGGATTACAAC 207415 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 207416 ATCCAGAAGGAATCGAC 207432 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || || || || || || |||||||| ||| | Sbjct 207011 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCAT-ACCCTTGAAGTTGAGTCCTCC 207069 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| | | || | || || || ||||| || || | || || || ||| Sbjct 207070 GACAGTATCGAGGCCGTGAAGGGCAAGATCCAGGACAAGGA-GGCATCCCTCCGGACCAA 207128 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || |||||||||||||| || ||||| | ||| || | |||||||||| Sbjct 207129 CAGCGCCTGATCTTTGCCGGCAAACAGCTCGAAGATGGACGTACCCTTTCCGATTACAAC 207188 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 207189 ATTCAGAAGGAGTCTAC 207205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008294121036