Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq215 113 4e-20 seq296 107 2e-18 >seq215 Length=105717 Score = 113 bits (124), Expect = 4e-20 Identities = 129/171 (75%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG-CTCGAA 30075 ||||| |||||||| ||||| ||||| ||||||| |||||||||| || || ||| || Sbjct 68918 AAATGTCTCCACTGAAACCCATACACAGGTCCCAAGTCTCCCTCTCGTCTATGACTC-AA 68860 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 || | |||||||||||| || || || || || | ||||||||||| || ||||| | Sbjct 68859 CCCTCGCTTGTCCAAAAACTCCCTAGAGCCATTTCCATCCCAGATCTTCACGCCCTTGGC 68800 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30186 || || || |||| || | |||||||| ||||| || ||||| || Sbjct 68799 AGATAGAAGCTTAGAGTCCGTTGTACCTCTGACAAACCATAGGAGCTCTTC 68749 >seq296 Length=2232338 Score = 107 bits (118), Expect = 2e-18 Identities = 128/171 (75%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG-CTCGAA 30075 ||||| |||||||| ||||| ||||| ||||||| |||||||||| || || ||| || Sbjct 1744338 AAATGTCTCCACTGAAACCCATACACAGGTCCCAAGTCTCCCTCTCGTCTATGACTC-AA 1744396 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 || | |||||||||||| || || || || || | ||||||||||| || ||||| || Sbjct 1744397 CCCTCGCTTGTCCAAAAACTCCCTAGAGCCATTTCCATCCCAGATCTTCACGCCCTTGTC 1744456 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30186 || || || || | || | ||||| || |||||||| || || || Sbjct 1744457 CGACAGAAGCTTAGAATCCGTCGCACCTCTAACAAACCACAGAAGTTCTTC 1744507 Score = 89.7 bits (98), Expect = 4e-13 Identities = 191/283 (67%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 29509 CATCCTCATCCTTATGGAGGGGTGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTT 29568 |||| |||| ||| | ||||| || ||||| ||||| | |||||||| Sbjct 1743753 CATCTTCATTGCTATTGTCGGGTGCGGATCGTACCCCTCAACCACAAAATCCTCGCTAAC 1743812 Query 29569 AAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTC 29628 ||| || || | || ||| ||| || ||||| | || || || || ||||| Sbjct 1743813 AAAATCATCAATATCCTTCACATCCCTCTTCCACCTCAACTTCGGGAACGGCCTCGGCTC 1743872 Query 29629 CCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAG 29688 |||||| | ||| | | |||||| || |||||||| |||| || || ||||| |||| Sbjct 1743873 CCTCTCCAACTGTACCTTCAGCGCATCGACGTGGTCCCGGTACACATGCGCATCACCCA- 1743931 Query 29689 GGTGT-GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 29747 | ||| || | ||| |||||| | ||||| | || ||||||| ||||||| Sbjct 1743932 GCTGTATGATCAGCTCGTGCGGTTCCGTATCTGTGACTTTGGCAATCATGTGTGTGAGGA 1743991 Query 29748 GAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC 29790 | | |||| ||||||||| ||||| | ||||| || | ||| Sbjct 1743992 GGGCGTAGGAGGCGATGTTGAAGGGGATGCCGAGGCCGAGGTC 1744034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161630813862