Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-22 >seq1 Length=1832336 Score = 122 bits (134), Expect = 1e-22 Identities = 384/586 (66%), Gaps = 12/586 (2%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || |||||||| ||||| || ||||| || |||||||| || || | ||| Sbjct 896001 TCGTTGGAGAAGGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATAGAGGCG 896060 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA- 48301 || || || || ||||| || || || ||||| || || ||| || | ||| || | Sbjct 896061 AAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCGAAGGCGACGAGACGCTCGGCGAAG 896120 Query 48302 -ACTGGCT-TCGT-TGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358 || | | | || |||| ||||| || | ||||| || ||||||||||| | || || Sbjct 896121 GACGAGTTCTTGTCTGTG-ATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGG 896179 Query 48359 CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATC 48418 || || || || || | ||||| | | | ||| || || | ||| || || Sbjct 896180 GATGGTCTCGATGGCGTCGAAGAGGTATTCGCGCTGCTTGGGGTCCTTGATGTAGGTGTC 896239 Query 48419 TATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAA 48478 || | || || | |||||||| || || || || ||||| || ||||| || Sbjct 896240 GATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAA 896299 Query 48479 ACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTAC 48538 || | ||| || | | ||| ||||| | | ||||| || | | ||||| || || Sbjct 896300 GCAACGCGCCTCGGCGGCCTGCACCTCGTTGGAGAATCGCTCGACGAGGTTCTCGTTGAC 896359 Query 48539 TATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGA 48598 || || || ||||| || || || | || || || || | |||||| Sbjct 896360 GATACCGTCGGAGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAAGTGGCGCTCGTTGTC 896419 Query 48599 AGTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 48655 | || || || |||||| | || || || | || | || || |||||||| Sbjct 896420 GTTGAGCTTCTTCTCCCAGTCGTGCTGGTCCTTGGAGAGGTCCATCTCCTCTGCTGTCCA 896479 Query 48656 AAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAAT 48715 || || ||||| || || || ||||| | ||| || ||| ||||||||| ||||| | Sbjct 896480 GAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGATCTCATGGTATTGGATAGGGAATAG 896539 Query 48716 AACAAATC-TAT-TTGGATTTTTTGCAAGGATAGGTTCCATGACTA 48759 ||| || | | | ||||| | || |||| ||| |||||| ||| Sbjct 896540 AACGAAGCGTCTCTTGGACTCGATG--AGGAGAGGCTCCATGTCTA 896583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694666047374880