Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq165 140 7e-28 seq54 127 5e-24 >seq165 Length=362420 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || |||||||||||||| || |||||||| ||||||| | ||| | || || Sbjct 206994 AGCACGAGGTGAAGAGTAGACTCCTTCTGGATGTTATAATCGGAGAGAGTACGACCGTCC 206935 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || |||||||| || | ||| || || | | ||| || ||||| ||| Sbjct 206934 TCAAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCT 206875 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| || |||| ||| | ||||| || ||| |||||||| || || || Sbjct 206874 TGAATCTTTCCCTTAACAGCCTCGATACTGTCGGAGGACTCGACTTCAAGGGTGATGGTC 206815 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 206814 TTGCCGGTGAGCGTCTTAACGAAGATCTGCAT 206783 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| |||||||| || ||||| || || |||| | || | |||||||| | Sbjct 206708 CAAGGTGAAGGGTAGACTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAA 206649 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || |||||||||||||| | ||| ||||| | | ||| || ||||| ||||||| Sbjct 206648 GCTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAA 206589 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | ||| | || || ||| ||| || ||||| || ||||| |||| Sbjct 206588 TCTTGCCCTTCACCGCCTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGC 206529 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| || |||| |||||| Sbjct 206528 CGGTGAGAGTCTTGACAAAGATCTGCAT 206501 Score = 122 bits (134), Expect = 2e-22 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || || ||||||||||| || || ||||||||||||| | || | |||||||| Sbjct 207217 ACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTTCG 207158 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||| ||||| ||||| || | ||| ||||||| | ||| || ||||| || || Sbjct 207157 AGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGCC-TCCTTGTCCTGG 207099 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || || | ||| | ||||| || ||| |||||||| || || || ||| Sbjct 207098 ATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCTTG 207040 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||||||||| || |||| |||||| Sbjct 207039 CCGGTGAGAGTCTTGACAAAGATCTGCAT 207011 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 |||||||| || || || || |||||||||||||| | ||| || | ||||| || || Sbjct 207441 AGATGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGC 207382 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 || || |||||||| | | ||| || || | | || || ||||| || || || Sbjct 207381 TGCTTGCCCGCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATC 207322 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || |||||||| ||| | ||||| ||| ||| || || || ||||| || || ||| Sbjct 207321 TTGCCTTTGACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCC 207262 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||| | ||||| Sbjct 207261 GTAAGCGTCTTCACGAATATTTGCAT 207236 >seq54 Length=1324731 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 ||||||||||||| ||||| || ||||||||||| |||| || || | ||||| || | Sbjct 967521 CAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGA 967462 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| || | ||||||||| | | ||| || ||||| || || | Sbjct 967461 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGA 967402 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | ||| | ||| ||| ||| || ||||| || || || |||| Sbjct 967401 TCTTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGC 967342 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| |||||| Sbjct 967341 CGGTCAAAGTCTTGACGAAGATCTGCAT 967314 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| |||||||| || |||||||||||||| | | ||| | ||||| Sbjct 968037 AGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCC 967978 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | ||||||||||| | ||| || ||||| || Sbjct 967977 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 967918 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||||| | ||| | | ||| ||| ||| || ||||| || || || Sbjct 967917 TGAATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTC 967858 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | ||||| ||||||| |||||| Sbjct 967857 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||||||||| || ||||| || || |||||||| || | | ||| | Sbjct 967816 GAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTACG 967757 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| || | ||||||||| | | ||| || || Sbjct 967756 GCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTC 967697 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || ||| || || | ||| | | ||| ||| ||| || || || || Sbjct 967696 CTTGTCCTGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACCTCGAGCGT 967637 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || | ||||| ||||||| |||||| Sbjct 967636 GATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || ||||||||||| || || ||||| ||||| |||| | || | || || Sbjct 967298 GAGGACGAGGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCGGAGAGGGTCCGACCGTC 967239 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || |||||||| ||||| | ||||||||||| | || || ||||| || Sbjct 967238 CTCGAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTC 967179 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || |||||| | ||| | | ||| || ||| || || ||||| || || Sbjct 967178 CTGAATCTTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTCAACCTCGAGAGTGATGGT 967119 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | ||||| || |||| |||||| Sbjct 967118 CTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 967086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153816113684707