Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq54 125 5e-24 seq165 122 6e-23 >seq54 Length=1324731 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| |||||||||||||| | || ||| | || || Sbjct 968034 ACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCCTCG 967975 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| |||||||| || | ||| | || ||||| ||| Sbjct 967974 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGA 967915 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||| ||||| || || ||||| | ||| |||||||| Sbjct 967914 ATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGACCTCAAGCGTGATCGTCTTG 967855 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||| |||||||| ||||| Sbjct 967854 CCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Score = 100 bits (110), Expect = 2e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAG 44190 || ||||| || |||||| ||||||||||| |||| | || | || | || || || Sbjct 967519 AGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGT-ACGACCATCCTCGAG 967461 Query 44191 CTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTAT 44250 |||||| ||||| ||||| | ||||||||| || | ||| | || ||||| ||| || Sbjct 967460 CTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGAT 967401 Query 44251 CTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 ||| ||| | | | || | ||| | || || ||||| | ||| |||||||| || Sbjct 967400 CTTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCC 967341 Query 44311 CGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||||| |||||||| ||||| Sbjct 967340 GGTCAAAGTCTTGACGAAGATCTGCAT 967314 Score = 95.1 bits (104), Expect = 9e-15 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| || ||||||||||| ||||||||||| || | |||| ||| |||| || ||| Sbjct 967001 AGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCGTCCTCAAGC 966942 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| || || ||||||||||||||||| || Sbjct 966941 TGCTTTCCAGCGAAGATCAAACGCTGCTGGTC 966910 >seq165 Length=362420 Score = 122 bits (134), Expect = 6e-23 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || |||||||| ||||| |||||||||||||| | | ||| | || |||||| Sbjct 207441 AGATGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGC 207382 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || |||||||| ||||| ||||| | ||| | ||| ||||| ||| ||| Sbjct 207381 TGCTTGCCCGCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATC 207322 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || || | | | || |||| | || || ||||| | ||||| ||||||||| Sbjct 207321 TTGCCTTTGACAGCCTCGATACTGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTCCC 207262 Query 44312 GTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||||||||| ||||||||| Sbjct 207261 GTAAGCGTCTTCACGAATATTTGCATG 207235 Score = 105 bits (116), Expect = 5e-18 Identities = 152/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 44127 ACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||||||||| || || |||||| || ||||||||||||| || || | || | Sbjct 207219 ACACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGAAAGGGTACGTCCATCTT 207160 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | ||||| || ||||||||||||| ||||| || || | ||| | || ||||| ||| Sbjct 207159 CGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGGATGCC-TCCTTGTCCT 207101 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| | | || |||||| ||| || || || | || || |||| Sbjct 207100 GGATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACTCAACTTCAAGGGT-ATGGTCT 207042 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || ||||| ||||| || ||||| |||||| Sbjct 207041 TGCCGGTGAGAGTCTTGACAAAGATCTGCATG 207010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989009199589