Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq54 149 2e-30 seq165 134 3e-26 >seq54 Length=1324731 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || |||||||| || ||||| || || ||| Sbjct 967829 CAGATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCCGAC 967888 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||| |||||||||||||| || || ||||||||||||||||| Sbjct 967889 TCCATCGAGGCCGTCAAGGGTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 967948 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || |||||||| ||||| | |||||| | ||||| ||| || Sbjct 967949 CGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCTGATTACAACATC 968008 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || || |||||| Sbjct 968009 CAGAAGGAGTCTACCCTTCACCTTGTT 968035 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || ||||| || ||||| |||||||| || ||| ||| Sbjct 967089 CAGATCTTTGTCAAGACCTTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCTGAC 967148 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||||| |||||||||||||| || || || |||||||||||||| Sbjct 967149 TCCATCGAGGCCGTCAAAGGCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAGCAG 967208 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| || |||||||| || || |||| || |||| || || || Sbjct 967209 CGTCTTATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGGACCCTCTCCGACTACAATATC 967268 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || || || Sbjct 967269 CAGAAGGAATCTACTCTTCACCTCGT 967294 Score = 134 bits (148), Expect = 3e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || || |||||||| || ||||| || || ||| Sbjct 967317 CAGATCTTCGTCAAGACTTTGACCGGCAAGACGATCACGCTTGAGGTCGAGTCTTCTGAC 967376 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | |||||| |||||| ||||| ||||| || || || |||||||| |||||||| Sbjct 967377 TCTATCGAGGCCGTCAAGGGCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAG 967436 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || ||||||||||| || |||||||| ||||| | || |||| |||| || ||| | Sbjct 967437 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTAC-CTTGTCCGACTACAACAT 967495 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 ||| || || || || || ||||||| Sbjct 967496 CCAGAAGGAGTCGACTCTTCATCTTG 967521 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| ||||| || || || ||||||||||||||||| || ||| ||| Sbjct 966728 CAGATCTTCGTGAAGACTCTGACTGGCAAGACGATCACCCTCGAGGTCGAGTCCTCTGAC 966787 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| ||||| |||||| |||||||| || || Sbjct 966788 TCCATCGAGGCTGTCAAGGGAAAGATCCAGGACAAGGAGGG 966828 >seq165 Length=362420 Score = 134 bits (148), Expect = 3e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || |||||||| || || || || ||||| || || || ||| ||| Sbjct 207014 CAGATCTTTGTCAAGACTCTCACCGGCAAGACCAT-ACCCTTGAAGTTGAGTCCTCCGAC 207072 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | |||||| ||| || ||||| |||||||| || || |||||||||||||| || Sbjct 207073 AGTATCGAGGCCGTGAAGGGCAAGATCCAGGACAAGGA-GGCATCCCTCCGGACCAACAG 207131 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| |||||||||||||||||| | || ||| ||||||| ||| | Sbjct 207132 CGCCTGATCTTTGCCGGCAAACAGCTCGAAGATGGACGTACCCTTTCCGATTACAACATT 207191 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 207192 CAGAAGGAGTCTACTCTCCACCTGGT 207217 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||||| || || || ||| ||| Sbjct 206786 CAGATCTTCGTTAAGACGCTCACCGGCAAGACCATCACCCTTGAAGTCGAGTCCTCCGAC 206845 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | |||||| || || ||||||||| ||||| || || |||||||| || || || Sbjct 206846 AGTATCGAGGCTGTTAAGGGAAAGATTCAAGACAAGGAGGGCATCCCTCCCGATCAACAG 206905 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || |||||||| || || || | ||||| ||||||||||| || Sbjct 206906 CGTCTCATCTTCGCTGGCAAACAGCTTGAGGACGGTCGTACTCTCTCCGATTATAACATC 206965 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 206966 CAGAAGGAGTCTACTCTTCACCTCGT 206991 Score = 127 bits (140), Expect = 5e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || |||||||| || || || |||||||| ||||| || || || Sbjct 206504 CAGATCTTTGTCAAGACTCTCACCGGCAAGACTATCACCCTTGAGGTCGAGTCTTCTGAT 206563 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || ||| || || |||||||| || || || || |||||||| ||||| || Sbjct 206564 AGTATTGAGGCGGTGAAGGGCAAGATTCAAGATAAGGAGGGCATCCCTCCCGACCAACAG 206623 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||||| ||||||||| | || ||| |||| ||||| || Sbjct 206624 CGTCTTATCTTCGCCGGCAAGCAGCTTGAAGATGGACGTACCCTTTCCGACTATAATATC 206683 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 206684 CAGAAGGAGTCTACCCTTCACCTTG 206708 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || ||||| || || ||||||||||| || || ||| Sbjct 207239 CAAATATTCGTGAAGACGCTTACGGGAAAGACAATTACCCTCGAGGTCGAGTCTTCTGAC 207298 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | |||||| |||||| ||||| |||||||| || || || ||||| || || || Sbjct 207299 AGTATCGAGGCTGTCAAAGGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAACAG 207358 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || ||||| || |||||| | || | | ||||| ||| || Sbjct 207359 CGCTTGATCTTCGCGGGCAAGCAGCTGGAGGATGGACGCACGTTATCGGATTACAACATC 207418 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || ||||| || || ||||| Sbjct 207419 CAGAAGGAATCGACGCTTCATCT 207441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203726310970498