Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Irpex_20lacteus_20[genbank_20GCA_5F001986395.2_202017-07-10] 317 sequences; 44,362,654 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq165 136 4e-27 seq54 134 1e-26 seq257 95.1 1e-14 >seq165 Length=362420 Score = 136 bits (150), Expect = 4e-27 Identities = 170/229 (74%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||| || || || ||||||||||||||| || ||||| Sbjct 207235 GCCTCCACGGAGACGCA-CACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCGGA 207177 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || | || |||||||| |||||||| || ||||||||||||||||||| || Sbjct 207176 AAGGGTACGTCCATCTTCGAGCTGTTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGG 207117 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||||| | | | | ||||| |||| || Sbjct 207116 GATGC-CTCCTTGTCCTGGATCTTGCCCTTCACGGCCTCGATACTGTCGGAGGACT-CAA 207059 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || | ||| || || || || || ||||| || || ||||||||| Sbjct 207058 CTTCAAGGGTATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCATG 207010 Score = 111 bits (122), Expect = 1e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || ||| ||||||||||||||| || ||||| Sbjct 206500 GCCTCCACGGAGACGCAGAACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCGGA 206441 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||||| | || || || ||||| |||||||| || |||||||| ||||| | ||| Sbjct 206440 GAGGGTGCGCCCATCCTCAAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGG 206381 Query 41755 AACGCT 41760 || ||| Sbjct 206380 AATGCT 206375 Score = 111 bits (122), Expect = 1e-19 Identities = 151/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||| ||||| |||||||| ||||| || || || | ||||| | || || ||| Sbjct 207441 AGATGAAGCGTCGATTCCTTCTGGATGTTGTAATCCGATAACGTGCGTCCATCCTCCAGC 207382 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 |||||||| ||||| |||| ||||||||| || | |||| | |||||||||| ||| Sbjct 207381 TGCTTGCCCGCGAAGATCAAGCGCTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATC 207322 Query 41777 TTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTAC 41834 || || || | ||| || |||| ||||| ||||| | || || || || | Sbjct 207321 TTGCCTTTGACAGCCTCGATAC--TGTCAGAAGACTCGACCTCGAGGGTAATTGTCTTTC 207264 Query 41835 CCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| |||||||| ||||| || |||||| Sbjct 207263 CCGTAAGCGTCTTCACGAATATTTGCATG 207235 Score = 109 bits (120), Expect = 5e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| || ||||||||||| ||||| || | || || ||||||||||||||||| Sbjct 206692 CTCCTTCTGGATATTATAGTCGGAAAGGGTACGTCCATCTTCAAGCTGCTTGCCGGCGAA 206633 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || ||||||||||| | || | || |||||| || || || ||||| || Sbjct 206632 GATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTATCTTGAATCTTGCCCTTCACCGC 206573 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | | || ||||| ||||| | || || || || || || || ||||| || Sbjct 206572 CTCAATACTATCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTGAGAGTCTTGAC 206513 Query 41851 GAAAATCTGCATG 41863 || ||||||||| Sbjct 206512 AAAGATCTGCATG 206500 >seq54 Length=1324731 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || ||| ||||||||||||||| ||||| || Sbjct 967824 CCTCCACGGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 967765 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || |||||||||||||| ||||| || || ||||| ||||| | || Sbjct 967764 AGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 967705 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| ||| ||||| | | | | ||| ||||| ||| Sbjct 967704 ATGCCCTCCTTGTCCTGGATCTTTCCCTTCACGGCCTCGATGGAGTCAGAAGACTCGACC 967645 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| || || || || |||| ||||| ||||| |||||||| Sbjct 967644 TCGAGCGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 967598 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| || || || Sbjct 968052 CCACCACGGAGACGAAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAA 967993 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| ||||| |||| |||||| ||||||| || Sbjct 967992 AGAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGG 967933 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || | | ||| | | | | |||| ||||| || Sbjct 967932 ATGCCCTCCTTGTCC-TGAATCTTACCCTTGACGGCCTCGATGGAGTCGGAAGACTCGAC 967874 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || || |||| ||||| ||||| |||||||| Sbjct 967873 CTCAAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 967826 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || |||||||| || || ||||||||| Sbjct 967312 CCTCCACGAAGACGGAGGACGAGGTGAAGAGTAGATTCCTTCTGGATATTGTAGTCGGAG 967253 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| |||||||||||||||||||| || || ||||| ||||||| ||| Sbjct 967252 AGGGTCCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGA 967193 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || ||| ||| | | | | ||| ||||| || Sbjct 967192 ATACCCTCCTTGTCC-TGAATCTTGCCTTTGACGGCCTCGATGGAGTCAGAGGACTCAAC 967134 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || |||| ||||| || || |||||||| Sbjct 967133 CTCGAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATCTGCAT 967086 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||| || || ||||||||| ||||| |||||||| | ||| || | || |||||| Sbjct 967519 AGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGACCATCCTCGAGC 967460 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 |||||||||||||| || || ||||| ||||| | || | || |||||| ||| ||| Sbjct 967459 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATC 967400 Query 41777 TTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCC 41836 || ||| | | | | || ||| ||||| ||||| | ||| ||||| || || Sbjct 967399 TTGCCCTTGACGGCCTCGATAGAGTCAGAAGACTCGACCTCAAGCGTGATCGTCTTGCCG 967340 Query 41837 GTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||||| ||||| |||||||| Sbjct 967339 GTCAAAGTCTTGACGAAGATCTGCAT 967314 Score = 98.7 bits (108), Expect = 9e-16 Identities = 89/111 (80%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 41646 GACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCT 41705 |||||| || || || || |||||||||||||| ||||| ||||| ||||| ||||| Sbjct 967010 GACGTACCA--AGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGAC 966953 Query 41706 CGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAA 41756 |||| || |||||||| || ||||| |||| ||||| ||||| | ||||| Sbjct 966952 CGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGGGGAA 966902 >seq257 Length=1005854 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| ||||||||| ||||| |||||| Sbjct 387524 CCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 387465 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG 41750 | |||||| | || |||||||||||||||||||| || || ||||| ||||||| Sbjct 387464 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCG 387410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302168120400