Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq11 86.0 5e-12 >seq11 Length=169478 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 13165 GTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCC 13224 ||| | ||| ||||| ||| || || ||||| || ||||| ||||| ||||| || || Sbjct 25102 GTGGAGTCCCTCATCCCTAGAGATGAGTTCGTTGGAGAATGTGAGACCAGGCATGAGACC 25043 Query 13225 TCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGC 13284 | || |||| ||| || || | ||||||||||| || || || || |||||||| || Sbjct 25042 CCTCTTCTTAAGCCAGAAGATGGAGGCAAACGAACCAGAGAAGAAAATACCTTCAACGGC 24983 Query 13285 TGCAAACGCTATCAA 13299 || || || ||||| Sbjct 24982 GGCGAAGGCGATCAA 24968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982200401276