Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq11 116 3e-21 >seq11 Length=169478 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| || || | ||| ||||||||||| |||||||| || || Sbjct 9364 CCACCACGGAGCCGAAGCACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCACTG 9423 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || |||||||| || ||| |||| || ||||||||||| || ||| Sbjct 9424 AGCGTGCGTCCATCTTCCAGCTGCTTTCCAGCGAAGATCAACCGCTGCTGGTCGGGTGGG 9483 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || |||| | || | |||||| | ||| |||| Sbjct 9484 ATGCCTTCCTTGTCCTGGATCTTAGATTTGACATTGTCGATAGTATCTGAGGATTCGACT 9543 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGA 131214 |||| ||| | || ||||| || ||| Sbjct 9544 TCGAGGGTGATCGTCTTACCAGTGAGA 9570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012575793920