Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq11 86.0 4e-12 >seq11 Length=169478 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || || || || ||||||||||| ||| | ||| || || | Sbjct 10412 ATGCAAATCTTCGTCAAGACTTTGACCGGCAAAACCATCACCCTCGAAGTCGAGTCCTCC 10353 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | | ||| || ||| || || |||||| | ||| | ||| Sbjct 10352 GATACCATTGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGATCAA 10293 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| |||| || || ||||| |||||||| ||||| | ||| | |||| ||||| Sbjct 10292 CAGCGACTCATTTTCGCTGGTAAACAACTCGAAGACGGACGAACCCTCTCCGACTACAAC 10233 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || |||||| | || | ||| | || || || Sbjct 10232 ATCCAGAAGGAATCAACCCTTCATCTCGTTCTTCGTCTCCGTGGTGG 10186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124634143452