Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq11 118 1e-21 >seq11 Length=169478 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||||| || ||||| || || |||||||| || | || ||| || |||| Sbjct 10200 AAGAACGAGATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTC 10259 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| || || || || || ||||||| ||||| || || |||||||| || || || || Sbjct 10260 TTCGAGTTGTTTACCAGCGAAAATGAGTCGCTGTTGATCAGGAGGAATACCCTCCTTGTC 10319 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | ||||| || || ||||| | || | ||| Sbjct 10320 CTGAATCTTGCTCTTCACGTTGTCAATGGTATCGGAGGACTCGACTTCGAGGGTGATGGT 10379 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||||||| || ||||| |||||||| Sbjct 10380 TTTGCCGGTCAAAGTCTTGACGAAGATTTGCAT 10412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644562668720