Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq11 104 3e-17 >seq11 Length=169478 Score = 104 bits (114), Expect = 3e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || |||||||| | || | || ||||| | |||||||| |||||||| | |||||| Sbjct 24875 TTCGAAGCCATTGACACCATCCCTTGTATCCAAAAGAAGGCTCAATGGGCACTCAAATGG 24934 Query 65050 TTTGAC--ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGG 65107 | || ||||| ||| ||||||||||||| | | || || || || || | Sbjct 24935 ATC-ACTGACAAACGATCGA-CCTTCGCCGAGCGATTGATCGCCTTCGCCGCCGTTGAAG 24992 Query 65108 GTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGC 65167 |||| |||||||| || || || | | || | ||| | |||||| |||||||||||| Sbjct 24993 GTATTTTCTTCTCTGGTTCGTTTGCCTCCATCTTCTGGCTTAAGAAGAGGGGTCTCATGC 25052 Query 65168 CAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | || || ||||| || ||||| || || | |||||||| |||||| Sbjct 25053 CTGGTCTCACATTCTCCAACGAACTCATCTCTAGGGATGAGGGACTCCAC 25102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569316629440