Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq33 141 1e-27 >seq33 Length=1453386 Score = 141 bits (156), Expect = 1e-27 Identities = 183/253 (72%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| || || ||| ||| |||| | |||||||| || |||| ||||| || Sbjct 850313 CTGGTCGACGTAACGAGCGGTGGCGTCAAAGGCTCGGAGCATAGGTACGATACCGTTCGA 850254 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | |||||||| || || | ||||| ||| ||| || | ||||| | || || Sbjct 850253 GTATCCGTTGGTACCGGCAATGTAGGAGCCCTTGGCTCGAATGTTGTGAATGTGAAGTCC 850194 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || ||||| | ||||||||| | ||||| || | || ||||||||||| || Sbjct 850193 GATACCTCCGGCAGTCTTGGAGATCTGAGCGCAGGTCTTCAAAGTCTCGTAGATGCCGTC 850134 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||||| | |||| | || || ||||| || || |||| ||||| | || || Sbjct 850133 AATGGAGTCGTCTCGCATGGCGACAAGGAAGCAGGAGGACATTTGAGGGTGAGGAGTTCC 850074 Query 1630305 GGCGTTGAAGAGC 1630317 ||||||||| ||| Sbjct 850073 GGCGTTGAACAGC 850061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136081542046