Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq11 84.2 5e-11 >seq11 Length=169478 Score = 84.2 bits (92), Expect = 5e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 131879 GTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGA 131938 ||||||||||| ||||| || ||| | || | ||||| |||||||||||| | || Sbjct 24986 GTTGAAGGTATTTTCTTCTCTGGTTCGTTTGCCTCCATCTTCTGGCTTAAGAAGAGGGGT 25045 Query 131939 TTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACT 131998 | |||||||| ||| |||| ||||| || ||||||| || ||||| | | | || || Sbjct 25046 CTCATGCCTGGTCTCACATTCTCCAACGAACTCATCTCTAGGGATGAGGGACTCCACACC 25105 Query 131999 GAATTTGCT 132007 || || ||| Sbjct 25106 GACTTCGCT 25114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812222170518