Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq33 109 8e-18 >seq33 Length=1453386 Score = 109 bits (120), Expect = 8e-18 Identities = 176/253 (70%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 259930 GCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAA 259989 ||| || || ||||| || || | ||| || | || || ||||| || | | |||| Sbjct 850061 GCTGTTCAACGCCGGAACTCCTCACCCTCAAATGTCCTCCTGCTTCCTTGTCGCCATGCG 850120 Query 259990 GGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGC 260049 | ||| || || || |||||||| || || | ||| ||||| | ||||||||| | Sbjct 850121 AGACGACTCCATTGACGGCATCTACGAGACTTTGAAGACCTGCGCTCAGATCTCCAAGAC 850180 Query 260050 GGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGG 260109 ||||| || ||||| || | ||||| | || ||| |||| ||||| | || || Sbjct 850181 TGCCGGAGGTATCGGACTTCACATTCACAACATTCGAGCCAAGGGCTCCTACATTGCCGG 850240 Query 260110 CACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCG 260169 |||||||| | || ||||| | || || ||||| || | ||| ||| ||| || || Sbjct 850241 TACCAACGGATACTCGAACGGTATCGTACCTATGCTCCGAGCCTTTGACGCCACCGCTCG 850300 Query 260170 CTACGTCGACCAG 260182 |||||||||||| Sbjct 850301 TTACGTCGACCAG 850313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177807534830156