Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kockovaella_20imperatae_20[genbank_20GCA_5F002102565.1_202017-04-20] 38 sequences; 17,465,713 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq37 93.3 3e-14 >seq37 Length=816703 Score = 93.3 bits (102), Expect = 3e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 44129 CGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATA 44188 ||||| ||||| ||||| |||||||||||| ||||| || || |||||||| || Sbjct 353453 CGACTGGTCGCTTTTGCTTGTGTGGAAGGCATATTCTTCTCTGGCAGCTTTGCGGCTATT 353512 Query 44189 TTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGT 44248 || ||| | ||||| | ||| | |||||||| ||||| || || || ||| | || || Sbjct 353513 TTCTGGCTGAAGAAGAGGGGTCTCATGCCTGGCTTGACTTTCTCCAACGAGCTCATCAGC 353572 Query 44249 CGTGATGAAGG 44259 || |||||||| Sbjct 353573 CGGGATGAAGG 353583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455815928190