Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq29 109 1e-18 >seq29 Length=5849119 Score = 109 bits (120), Expect = 1e-18 Identities = 154/210 (73%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 230428 GACGCTATTCCATGTCGCCTT-ATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 ||||| |||| ||| ||| || ||||||||||| | | ||| | || || ||||| Sbjct 5169260 GACGCGCTTCC-TGTAAGCTTGATCGGCATGAACGCGACATTGATGTGTCAATATATCGA 5169318 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 ||||| ||||| || | | || || || || || |||| |||||||||| | ||| Sbjct 5169319 GTTCGTTGCCGATCGACTACTCGTCGCTCTCGGCAACAAGAAGTTGTACAACTCGACGAA 5169378 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 |||||| | |||||||| | || |||||||||||||||||||| || | ||| | | Sbjct 5169379 CCCCTTCGACTTTATGGACATGATCTCGCTTCAAGGGAAGACCAATTTTTGAGAAGCGGG 5169438 Query 230607 TGTCAG-TGACTATCAGAGGCCTGGTGTGA 230635 |||| | | || ||| ||| ||||||||| Sbjct 5169439 TGTCCGATTAC--TCAAAGG-CTGGTGTGA 5169465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823579845530