Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq23 140 3e-28 seq31 122 8e-23 >seq23 Length=3600692 Score = 140 bits (154), Expect = 3e-28 Identities = 294/432 (68%), Gaps = 6/432 (1%) Strand=Plus/Plus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 |||||| ||||| ||| | || ||||||| || || || ||||||||| | |||| Sbjct 3498578 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 3498637 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 || ||||||| || || || |||||||| || || | |||||| || || ||||| || Sbjct 3498638 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 3498697 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT-TTTGTTCG 14381 |||||||| || ||||| || || | |||| ||| |||| | ||||| ||||| | Sbjct 3498698 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAG-TGCTTCGTTTGTCAG 3498756 Query 14382 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14441 |||||||||| ||||| || | ||| || || | |||||||| || || | Sbjct 3498757 ATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGT 3498816 Query 14442 TAAATAAATGTTC-CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATA 14499 || | || | | | | || || | |||| | ||||||||| ||||| | || Sbjct 3498817 CGAAGAGATATGCGCGTTGATTAAGATCCTTG--ACGTATGTATCGATAAGCAGAGAGTA 3498874 Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14559 ||||||| || | ||||||||| ||| || || |||||||| | | || || | Sbjct 3498875 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 3498934 Query 14560 CCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14619 ||| || || |||| | || || |||||| || || ||||| ||| || Sbjct 3498935 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 3498994 Query 14620 TGCAAAAAATGC 14631 ||||| ||||| Sbjct 3498995 GGCAAAGAATGC 3499006 >seq31 Length=1678028 Score = 122 bits (134), Expect = 8e-23 Identities = 234/337 (69%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 14225 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 14284 || || || | ||| ||||||||||||||||| || || || |||| ||||| |||||| Sbjct 618637 CCTTCGTCACGACTGATAAGTTCGTTTGAAAAGGTCAACCCAGGCAATAATCCACGTTTT 618696 Query 14285 tttAACCAAAATATTGCA-GCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 || | |||||||| |||| ||||| |||||||| || || ||||| || | || | || Sbjct 618697 TTGATCCAAAATA-TGCACGCGAAAGATCCGGAGAAAAAAATTCCTTCGATGGCTGAGAA 618755 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTT--TTTTGTTCGATATCCATTTTCTAGCCCAT 14401 || | | |||||| |||| | ||| | | |||| |||||| || |||||| Sbjct 618756 TGCAACGAGTCGTTCCGCAAAAGTAACTTGATCGTCTTCG--ATCCATCTTAGTGCCCAT 618813 Query 14402 TCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA--AATGTTCCTTCT 14459 | | ||||| |||||| || || ||||| |||| | | || | |||| || ||| Sbjct 618814 GCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACTGAACAAGAATGATCGTTC- 618872 Query 14460 CTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT 14519 | | |||| || || || | ||| || || ||| |||| || || ||||||| Sbjct 618873 GAATGGATCTTG-GATATACGTTTGAATCAGCAAAGAATAAGTTTCTGAATGGATGTTTT 618931 Query 14520 CCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14556 |||| | ||| || ||||| || ||| ||| || Sbjct 618932 CCATCATTGACTGGAATCCATAGAAGGATCGAGCCTC 618968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345413091080