Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq23 194 1e-44 seq29 118 9e-22 seq2 109 5e-19 seq31 82.4 7e-11 >seq23 Length=3600692 Score = 194 bits (214), Expect = 1e-44 Identities = 397/581 (68%), Gaps = 27/581 (5%) Strand=Plus/Minus Query 57560 ATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGA 57619 |||||||| || || | |||||||| || |||||||||||||| |||||| ||||| Sbjct 3499143 ATATCCAGCTAT--GGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGA 3499086 Query 57620 AGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC--TCAAAGAATCT-GAGAGAAA 57676 | ||||| || | ||||| ||| ||| | | | ||| ||| ||| | | Sbjct 3499085 GATTGACCTCACTCATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCA 3499026 Query 57677 TTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTT 57736 ||| || | ||||| | || || || ||||| || || ||||| || ||||| ||| | Sbjct 3499025 TTTCATCACCCACGTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCT 3498966 Query 57737 GGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCA 57796 | | || | |||||| | |||||||||| | |||||| | | |||||| || || || Sbjct 3498965 GTTGGAGCGCTTTTCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCA 3498906 Query 57797 AGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAA 57856 | | || |||||||| ||||| |||| || || || || |||||||| ||||| || Sbjct 3498905 AATAATGATGGAAAACGTTCATTCTGAAACTTACTCTCTGCTTATCGATACATACGTCAA 3498846 Query 57857 GGAC----AACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCG 57912 ||| | | ||| | | || || ||| |||| || |||||||| || ||| Sbjct 3498845 GGATCTTAATCAACGCGCA---TAT-CTCTTCGACGCAATAGAAACAATACCGTGCATC- 3498791 Query 57913 CCAAG---AAGGCAGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTC 57965 ||| || || || ||| | ||||||||||| | || || | | ||| || Sbjct 3498790 --AAGCGCAAAGCCGACTGGGCCCTCAAATGGATATCTGACAAACG--AAG--CACTTTT 3498737 Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 || ||||| | | || ||||| || ||||| || || || ||||| || || || Sbjct 3498736 GCAGAGAGATTGGTGGCATTCGCTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCT 3498677 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| | ||||| |||||||||||||| ||||| || | | |||||| | Sbjct 3498676 TCCATTTTCTGGTTAAAGAAGCGCGGCCTGATGCCTGGCCTAACTTATTCAAACGAGCTC 3498617 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 || || || || ||| | ||||| ||||| ||||| || Sbjct 3498616 ATCAGCCGAGATGAAGGTTTACATACCGATTTCGCGTGTCT 3498576 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || |||||||| ||||||||||| ||||| | || ||||||||||| ||||||||||| Sbjct 922880 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 922939 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 ||||| ||||||| | | | || | || |||||||| || ||||| || | Sbjct 922940 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 922999 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || || || || || | ||| || || || || ||||| || || || || |||||| Sbjct 923000 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 923059 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGA 23565 | | ||||| ||||| | ||| || || Sbjct 923060 GCCCGAAGCATTGGCACAATACCATTCGA 923088 Score = 104 bits (114), Expect = 2e-17 Identities = 219/318 (69%), Gaps = 9/318 (3%) Strand=Plus/Plus Query 23624 CCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCC 23683 |||||||| ||| | ||||| |||| || || | |||||| || |||||||| || Sbjct 923206 CCTATGCCACCGGCTGATTTGCTGATCAAAGCACAGTTTTTCAGGGTATCGTAGATACCT 923265 Query 23684 TCGATGCTGTCCTCTTTGGTCGCGACCAAGAAA-CACGAAGACATTTGCG-CTTTGGGCG 23741 ||||| || ||||| | || | |||| || || || |||||||| | | || | Sbjct 923266 TCGATAGAATCATCTTTCAT-GCAAACAAGGAAGCATGAGGACATTTGAGGCGAAAGGGG 923324 Query 23742 TAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGT 23801 || |||| ||| || || || |||| || || || |||| | ||||| || |||| Sbjct 923325 TACCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAAATATCGCTCGGACATGAGGTTGT 923384 Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCA 23861 | || | | | | || || || ||||||||||| || | ||||| ||||| |||| Sbjct 923385 ATGTTTGCAAGACATGCTCGATATCGTCTCCGTGTATCCCAACAGCGACCCGCATGATCA 923444 Query 23862 TGTATTGAGGTCTCTCGACCGTGACG-CCGTTAA---TTTTGAACAGATATGAACGTTGC 23917 | | ||| || | ||| | | ||| ||||||| ||| || ||||| |||| | Sbjct 923445 TATGTTGTGGCCGCTC-AGCAATACGACCGTTAAGGCGAATGAGTAG-TATGACCGTTCC 923502 Query 23918 ATCGTTTTAAATCCAAAA 23935 | ||||||||||||||| Sbjct 923503 AAGGTTTTAAATCCAAAA 923520 >seq29 Length=5849119 Score = 118 bits (130), Expect = 9e-22 Identities = 294/443 (66%), Gaps = 24/443 (5%) Strand=Plus/Plus Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 ||||| || ||||| || ||||| ||||| ||||||||| | ||||| | || || | Sbjct 5168685 GCGTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAATCTTCTCGAACGCTTCTCGAAC 5168744 Query 57756 GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTG 57815 ||||| || || | ||||| | ||||| ||||| || || | || || ||| | Sbjct 5168745 GAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGATGGAGAACATT 5168804 Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT 57875 || || || | || || || |||||||| || ||| | || ||| | ||| |||| Sbjct 5168805 CACTCCGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTGTCGA---ACGT 5168861 Query 57876 AGA----CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTG 57928 || || || | || ||||| || || || ||| ||| ||||| ||||| Sbjct 5168862 -GATTTCCTTTTTGATGCTATCGAGACTATTCCTTGCATC---AAGCGCAAGGCCGAGTG 5168917 Query 57929 GTCAATCAAATGGATAAAAAGCGCCACGGCCACG-----TTCGCCGAGAGGCTAATCGCG 57983 | | | | ||||| | | ||| ||| |||| |||| | || | || Sbjct 5168918 GGCTCTGCACTGGATCA-----GTGACGAACACTCGGTTTTCGGCGAGCGTCTCGTAGCC 5168972 Query 57984 TTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAG 58043 || || || || ||||| || ||||| || ||| ||| ||| | || |||||||||||| Sbjct 5168973 TTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGAAG 5169032 Query 58044 AAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 || || || | ||||| ||| || |||| |||||| | || || || |||||| Sbjct 5169033 AAGCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGGGT 5169092 Query 58104 CTCCATACTGATTTTGCGTGCCT 58126 | ||||| || || || ||||| Sbjct 5169093 ATGCATACCGACTTCGCCTGCCT 5169115 >seq2 Length=1585523 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || || |||||||| | || ||||| |||| Sbjct 172070 CATGCAGATCTTCGTCAAGACACTCACGGGAAAGACGATCACTCTTGAGGTTGAGTCGTC 172011 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | || || || ||| |||||||||||| | ||||| ||||| Sbjct 172010 TGACACTATTGACAATGTTAAGGCGAAAATCCAGGACAAGGAAGGTATTCCGCCTGACCA 171951 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || |||||||| |||||||| || | || | ||||| || Sbjct 171950 ACAACGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCTGATTACAA 171891 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || || || || || || ||| | || | || |||| Sbjct 171890 TATTCAGAAAGAGTCAACCCTCCACCTTGTCCTTCGTCTTCGAGGAGGTA 171841 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || ||||| || ||||| || | || ||||| |||| Sbjct 171841 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACGATTACTCTGGAGGTTGAGTCGTCG 171782 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || || || |||||||||||| | ||||| ||||| Sbjct 171781 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAAGGTATTCCGCCTGACCAA 171722 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || |||||||| |||||||| || | || | ||||| || Sbjct 171721 CAACGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCTGATTACAAT 171662 Query 31373 ATTCAAAAAGAATCGACTCTTCATCT 31398 ||||| || || ||||||||||| || Sbjct 171661 ATTCAGAAGGAGTCGACTCTTCACCT 171636 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/207 (71%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 31194 TGCAAATTTTCGTAAAGA-CTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||| || || || |||| | |||| || || |||||||| | || || || | || Sbjct 1022408 TGCAGATCTTTGTGAAGAACATTGACCGGAAAGACGATCACTCTTGAAGTCGAGTCTTCT 1022467 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| || ||| | |||||| |||||| | || |||||||| Sbjct 1022468 GACACTATCGACAATGTCAAGGCAAAGATTCA-GGACAAAGAAGGCATTCCTCCCGACCA 1022526 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || || ||||| || |||||||| || | || | || ||||| Sbjct 1022527 ACAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAA 1022586 Query 31372 CATTCAAAAAGAATCGACTCTTCATCT 31398 |||||| ||||| || || |||||||| Sbjct 1022587 CATTCAGAAAGAGTCTACCCTTCATCT 1022613 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| || || || |||||| | || || || |||| Sbjct 1022181 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCT 1022240 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || || ||| | ||| ||||| || | || || ||||| Sbjct 1022241 GATACCATTGACAATGTGAAGGCAAAGA-TCCAGGATAAGGAGGGTATCCCTCCTGACCA 1022299 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || ||||| || ||| | ||||| ||| | |||||||| Sbjct 1022300 ACAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAA 1022359 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||||||||||||||||||||| || || Sbjct 1022360 TATCCAAAAAGAATCGACTCTTCATCTTGTTCT 1022392 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| || || |||||||||||||| | || || || | || Sbjct 172298 CATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTC 172239 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | ||| ||| ||||| ||| | || ||||| || Sbjct 172238 AGACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCA 172179 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 || || ||||| ||||| ||||| ||| | ||||| | | | || | || || | Sbjct 172178 ACAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGA-TGGACGCACCCTTTCTGACTACA 172120 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||||| || || || || ||||| || || ||| Sbjct 172119 ACATTCAGAAGGAGTCAACCCTTCACCTTGTTCTT 172085 >seq31 Length=1678028 Score = 82.4 bits (90), Expect = 7e-11 Identities = 190/279 (68%), Gaps = 17/279 (6%) Strand=Plus/Plus Query 23600 GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659 || |||||||| || | | || || ||||| |||| | ||| |||| ||||| Sbjct 581704 GCCCGAACGTTATGTATGCTGAGCCCAATGCCACCGCGC--TTTACTGATCAAAGCGCAG 581761 Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719 | |||||| ||||||||||| || || || |||||||| | | | ||| ||||| Sbjct 581762 T-TTTCAGGGTGTCGTAGATACCTTCTATCGAATCCTCTTTCATA-CAAACAAAAAACAA 581819 Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779 || |||||| | ||| || ||| | || ||| || || || | ||||| || ||| Sbjct 581820 GAGGACATT-GAGCTGAAGGTGTACCCGCATTGAAAAGGGTTGGAGTAGCGTGAGTGAAG 581878 Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATG--GCG---GCATCAATGTCCTCTCCGT 23834 || | | ||||| |||| ||||| | | | ||| |||||| || |||| Sbjct 581879 TAACGCCT-GACATAAGATCATACGTCTGCAAGATGCGCTCGCATCA------TCGCCGT 581931 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873 ||||||| | ||||| ||||| ||||| | ||| |||| Sbjct 581932 GTATACCAACCGCGACACGCATAATCATATGTTGTGGTC 581970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766227265520