Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 9e-14 >seq2 Length=1585523 Score = 91.5 bits (100), Expect = 9e-14 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 |||||||| || || |||||||||||||| | || | || ||||| ||||| ||| Sbjct 171645 GTCGACTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCA 171704 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTGT 33289 ||| || | |||||| ||||| | || || ||||| || || | | ||||| Sbjct 171705 GCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATCTTCGCC--- 171761 Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 ||||| | | ||| ||||| | | ||| |||||||| ||||| ||||| || || Sbjct 171762 TTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTCCTGTGAGG 171821 Query 33350 GTTTTTACGAAAATTTGCAT 33369 || || ||||| || ||||| Sbjct 171822 GTCTTGACGAAGATCTGCAT 171841 Score = 89.7 bits (98), Expect = 3e-13 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 || |||||||| || |||||||||||||| | || | || ||||| ||||| ||| Sbjct 171873 GTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCA 171932 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTGT 33289 ||| || | |||||| ||||| | || || ||||| || || | | ||||| Sbjct 171933 GCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCC--- 171989 Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 || || | | ||| ||||| | | ||| || ||||| ||||| |||||||| || Sbjct 171990 TTAACATTGTCAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTCTTTCCCGTGAGT 172049 Query 33350 GTTTTTACGAAAATTTGCATG 33370 || || ||||| || |||||| Sbjct 172050 GTCTTGACGAAGATCTGCATG 172070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777479561838