Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 6e-15 seq26 87.8 9e-13 seq12 82.4 4e-11 >seq4 Length=1205196 Score = 95.1 bits (104), Expect = 6e-15 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 || |||||| || ||||| | | |||||||||| ||||||||||||||||||||| Sbjct 559517 ATCAAAAATATAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACG 559458 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| ||||||||||||| | ||||| Sbjct 559457 ACGCTCTAACCAACTGAGCTAGTCGGCCG 559429 Score = 91.5 bits (100), Expect = 8e-14 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || |||||| | | |||||||||| |||||||||||||||||||||||||||| || Sbjct 34097 AAGTTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAAC 34156 Query 11512 CAACTGAGCTAATGGGCCG 11530 ||||||||||| | ||||| Sbjct 34157 CAACTGAGCTAGTCGGCCG 34175 >seq26 Length=3662990 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 157810 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 157751 Query 11528 CC 11529 || Sbjct 157750 CC 157749 >seq12 Length=4000690 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 215911 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 215852 Query 11528 CC 11529 || Sbjct 215851 CC 215850 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261491101205356