Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 9e-16 >seq2 Length=1585523 Score = 98.7 bits (108), Expect = 9e-16 Identities = 145/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 23992 TGCAAGTGTTTGTAAA-AACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||| | ||||| || |||||| || ||||| |||| || | ||||||||| | Sbjct 1022408 TGCAGATCTTTGTGAAGAACATTGACCGGAAAGACGATCACTCTTGAAGTCGAGTCTTCT 1022467 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | ||||| ||||||| |||||||||||||| |||||||| ||| Sbjct 1022468 GACACTATCGACAATGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAA 1022527 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | | || ||||| | || |||| | | | || |||||| Sbjct 1022528 CAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAAC 1022587 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 ||||| ||||| ||||| ||||| Sbjct 1022588 ATTCAGAAAGAGTCTACCCTTCAT 1022611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | || || ||| |||| || | || |||||| | Sbjct 172297 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 172238 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| || || || ||||| |||||||||||| Sbjct 172237 GACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAA 172178 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || |||| || | || ||||||||| |||||||||| | | | | || || ||| Sbjct 172177 CAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAAC 172118 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 ||||| || || || || |||| Sbjct 172117 ATTCAGAAGGAGTCAACCCTTCA 172095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935837564805