Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq29 217 3e-51 >seq29 Length=5849119 Score = 217 bits (240), Expect = 3e-51 Identities = 323/456 (71%), Gaps = 9/456 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || ||||| ||||||||||| ||||| ||||| ||||| || | | ||| | Sbjct 5168682 CTCGCGTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAATCTTCTCGAACGCTTCTCG 5168741 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || || ||| | |||||| || ||||||||||| |||||||| || |||||| Sbjct 5168742 AACGAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGATGGAGAAC 5168801 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| ||| ||| | || || |||| |||||| || || ||||| ||| Sbjct 5168802 ATTCACTCCGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTGTCGAACGT 5168861 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | || || | || || ||||| || || ||||||||| ||||| || ||||| Sbjct 5168862 GATTTCCTTTTTGATGCTATCGAGACTATTCCTTGCATCAAGCGCAAGGCCGAGTGGGCT 5168921 Query 42663 CTCAACTGGATCGAGAGTCCCG---ACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACC 42719 || |||||||| ||| || || | ||||||||| | || ||||||||| | Sbjct 5168922 CTGCACTGGATC---AGTGACGAACACTCGGTTTTCGGCGAGCGTCTCGTAGCCTTTGCT 5168978 Query 42720 GCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAG 42779 || || || ||||| |||||||| ||| ||||||| |||||||| ||| | ||| || Sbjct 5168979 GCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGAAGAAGCGT 5169038 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 | | ||||| || | | ||||| ||||| |||||||| | || ||||| ||||| Sbjct 5169039 GGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGGGTATGCAT 5169098 Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC 42875 | ||||| |||||||| || ||| ||||||||| Sbjct 5169099 ACCGACTTCGCCTGCCTTCTCTTC---AGCCACCTC 5169131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338834068560