Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq29 100 6e-16 >seq29 Length=5849119 Score = 100 bits (110), Expect = 6e-16 Identities = 141/193 (73%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 243561 GCTT-ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCA 243619 |||| || ||||||||| | | | ||| | || || ||||| ||||| ||||| || Sbjct 5169276 GCTTGATCGGCATGAACGCGACATTGATGTGTCAATATATCGAGTTCGTTGCCGATCGAC 5169335 Query 243620 TTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679 | || |||| || || | |||| |||||||||| | ||||||||| | |||||||| Sbjct 5169336 TACTCGTCGCTCTCGGCAACAAGAAGTTGTACAACTCGACGAACCCCTTCGACTTTATGG 5169395 Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA-TCAA 243738 | | || |||||||||||||| || || | || || ||||| || ||||| |||| Sbjct 5169396 ACATGATCTCGCTTCAAGGGAAGACCAA--TTTTTGAGAAGCGGGTGTCCGATTACTCAA 5169453 Query 243739 CGCCCTGGTGTGA 243751 | ||||||||| Sbjct 5169454 AG-GCTGGTGTGA 5169465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879561949850