Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 >seq2 Length=1585523 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| | || | | |||||||||| |||||||||||||| Sbjct 172070 GCCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGA 172129 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || ||||| || || |||| ||||||| || ||||| || ||||| Sbjct 172130 AAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGG 172189 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || || || || || || | || | || | ||| || | ||||| | ||||| Sbjct 172190 AATGCCCTCCTTATC-CTGTATCTTGGCCTTCACGTTG-TCGATCGTGTCTGAAGACTCG 172247 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||||| | || | |||||| || || || || || ||||| || |||||| || Sbjct 172248 ACCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCATGCCT 172301 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/196 (71%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || |||||||| ||||| | ||||| ||||| | || || || | | Sbjct 1022601 GACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTGCTTTCCAGCA 1022542 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| | |||||||||||| ||||| || ||||||||||| ||| | |||| || Sbjct 1022541 AAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTC-CTGAATCTTTGCCTTGAC 1022483 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT- 138597 |||| || | ||||| | ||||| || || | || | ||| || || |||| ||| Sbjct 1022482 ATTG-TCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTCTTTCCGGTCAATGTTC 1022424 Query 138598 TTTACAAAAATCTGCA 138613 || ||||| ||||||| Sbjct 1022423 TTCACAAAGATCTGCA 1022408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262207698320