Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 >seq2 Length=1585523 Score = 104 bits (114), Expect = 2e-17 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || |||| || ||||| || || || || || || || ||||| || | || | Sbjct 1022623 AGACTCACCA--AGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGA 1022566 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| ||||| || ||||| || | ||||| || || ||||| || |||||||||||| Sbjct 1022565 CCATCCTCCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCT 1022506 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 || || ||||| ||| |||| || | ||||| |||||||||||||| ||||| Sbjct 1022505 TTGTCCTGAATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGAGTG 1022446 Query 45303 ACCGTTTTGCCGGTTAGAGTT-TTTACAAAAATTTGCA 45339 | ||| || ||||| | ||| || ||||| || |||| Sbjct 1022445 ATCGTCTTTCCGGTCAATGTTCTTCACAAAGATCTGCA 1022408 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | || || || || ||||| ||||| || || || || || Sbjct 172068 ATGCCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCA 172127 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | || | |||||| || || || Sbjct 172128 GAAAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGA 172187 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || ||||| || || || || | || | || | ||||| |||||||| Sbjct 172188 GGAATGCCCTCCTTATCCTGTATCTTGGCCTTCA-CGTTGTCGATCGTGTCTGAAGACTC 172246 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || | ||| | ||||||||| || || || || ||||| |||||||| Sbjct 172247 GACCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCAT 172297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003024848760