Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq29 107 8e-18 seq2 98.7 4e-15 seq4 93.3 2e-13 seq12 91.5 6e-13 >seq29 Length=5849119 Score = 107 bits (118), Expect = 8e-18 Identities = 244/363 (67%), Gaps = 7/363 (2%) Strand=Plus/Plus Query 451245 CTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTG 451304 |||||||||| || || ||||| || |||||||||||||| || ||| || ||| Sbjct 3849214 CTGAAGAAATATCTTCGATGGTCCTCCTCAAAATGAAAGAAACCGCCGAAGCATTCCTTG 3849273 Query 451305 GTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGC 451364 | | | | || | |||| | || ||||||||||| |||||||| | ||||| | Sbjct 3849274 GCACCACTATCACCAACTCAGTCGTGACCGTTCCCGCTTACTTCAATGACTCTCAACGTC 3849333 Query 451365 AAGCAACTAAAGATGCAGGA--CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 | ||||| || || || ||| |||| ||| || | ||||| || || || || ||||| Sbjct 3849334 AGGCAACCAAGGACGCCGGAACCATA-TGC-GGAATGAATGTCCTCCGTATCATCAATGA 3849391 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaa 451482 ||| || || || || | || ||||| || | || ||| | | | || | Sbjct 3849392 ACCAACTGCCGCGGCGATTGCTTATGGCCTTGACAA---AAAGGTTTCTGGCGAGCGTAG 3849448 Query 451483 TATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGA 451542 | | || | || ||| | || ||||||||| ||| ||| | | |||| ||||| Sbjct 3849449 TGTCTTGATTTTCGATCTGGGAGGAGGAACTTTCGATGTTTCCCTGTTGACAATCGAAGA 3849508 Query 451543 TGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 || | || ||||| || || || |||||| || ||||| || ||||| || |||| Sbjct 3849509 AGGTATCTTCGAAGTCAAAGCCACTGCTGGTGACACCCATCTTGGCGGTGAGGACTTTGA 3849568 Query 451603 TAA 451605 || Sbjct 3849569 CAA 3849571 >seq2 Length=1585523 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||| || || || || || | || || || || || Sbjct 1022180 AATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTC 1022239 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | || ||| || || |||||||| || || |||||||| || Sbjct 1022240 TGATACCATTGACAATGTGAAGGCAAAGATCCAGGATAAGGAGGGTATCCCTCCTGACCA 1022299 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||| | || || | || || || || |||||||| | ||| | |||||||||| Sbjct 1022300 ACAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAA 1022359 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | || || | || ||||| Sbjct 1022360 TATCCAAAAAGAATCGACTCTTCA 1022383 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || || || || ||||| || ||| | || || || || || Sbjct 172297 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 172238 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || || |||||||| || |||||||| |||||| Sbjct 172237 GACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAA 172178 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| |||| ||| | || || || || ||||||||| | || | | || || || Sbjct 172177 CAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAAC 172118 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| |||| |||||| Sbjct 172117 ATTCAGAAGGAGTCAACCCTTCAC 172094 >seq4 Length=1205196 Score = 93.3 bits (102), Expect = 2e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || || || |||||||| || ||||| ||||| || ||||| || Sbjct 430925 GCTGTTATCACGGTCCCTGCCTACTTCAATGACGCCCAACGTCAAGCCACGAAAGACGCT 430866 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || || ||||||||| | |||||||||| | || ||||||||||| || || || | Sbjct 430865 GGTCAGATTGCTGGTCTTGATGTTCTTCGTGTCATCAATGAACCTACGGCTGCCGCATTG 430806 Query 451442 GCATATGGACT 451452 || ||||| || Sbjct 430805 GCCTATGGTCT 430795 >seq12 Length=4000690 Score = 91.5 bits (100), Expect = 6e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 391155 ATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 ||||||||||||||||||||||| || ||| | || || ||||| ||||||||| ||||| Sbjct 1092277 ATTCCTCCTGATCAACAACGTTTGATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACT 1092336 Query 391215 TTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTA 391259 | | || ||||| ||| | ||||| | || || ||||| ||| Sbjct 1092337 CTTTCCGACTATAACATTCAGAAGGAATCGACGCTCCACTTGGTA 1092381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717615269348