Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq29 170 1e-36 seq28 143 2e-28 seq27 127 2e-23 seq4 91.5 1e-12 >seq29 Length=5849119 Score = 170 bits (188), Expect = 1e-36 Identities = 461/694 (66%), Gaps = 16/694 (2%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||||||||||| ||||| | |||||| |||||||| | ||||| ||||| |||||| Sbjct 3850404 TTATCAGCGGCAGAAACATTCAAAATACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 3850345 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCC-AGATTATT 517368 ||||| || || | ||||||||||||| || || | | ||||| || || Sbjct 3850344 TGAGGTACACCACGGGGAGCAGGTGGGAT-ACTAGAAAGCTCGAACTTCCCAAGGAGGTT 3850286 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428 || || |||||| |||||||||||||| | |||||| || ||| ||| || Sbjct 3850285 GTTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTT 3850226 Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 517488 ||| | ||||||| ||| | || || || || | || ||||| | | || Sbjct 3850225 ATCAGCGTAAGTTGAAAAGGTTTCAGACTTCTTGATCGGGACAGTGGTGTTACGCTTGAT 3850166 Query 517489 AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 517548 |||||| | |||||| || ||||| | ||| ||||| || |||| ||| || | Sbjct 3850165 GGGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAG 3850106 Query 517549 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 517608 || | | || ||| || ||| ||| | ||| || || || ||||| | ||| Sbjct 3850105 GAGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAGGATCGCAGCTTGGACAGC 3850046 Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668 |||||| || |||||||| |||||||| || | | | || | | ||||||||||| Sbjct 3850045 AGCACCGTAGGCAACAGCCTCATCAGGGTTGATGCTCTTGTTGGGCTCCTTACCATTGAA 3849986 Query 517669 AAAATTTGA-AAGAAGTTGTC-TTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726 || | || | || ||| | ||| ||||||||||| || || || || | || Sbjct 3849985 GAAGTCGGAGACGAGCTTGACGATAC--GAGGAATACGAGTCGAACCGCCGACAAGGACG 3849928 Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786 ||||| || || | | ||||| | || ||||| | || || || || || || Sbjct 3849927 ATTTCGTGTACGTTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCG 3849868 Query 517787 AGACCCGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGT 517842 ||| ||| | || | | | || ||||| ||||| || | ||||| ||| Sbjct 3849867 AGA-GTGCTACGGAAAAGGCCCTGGCAGAGTTCCTCGAAACGGGCACGTGTAAGGGAAGT 3849809 Query 517843 GACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 517901 | || || ||||| || || |||| ||||||| ||| |||| || |||| | || Sbjct 3849808 G----TAGAAGTCAATACCCTCATACAAGGAATCAATTTCGATCGAGGTCTGAGCGGCAG 3849753 Query 517902 AAGATAGTGCACGTTTAGCACGTTCACATGCTGT 517935 |||||| | ||| || |||||||| || || || Sbjct 3849752 AAGATAAAGTACGCTTGGCACGTTCGCAAGCAGT 3849719 >seq28 Length=2065898 Score = 143 bits (158), Expect = 2e-28 Identities = 456/692 (66%), Gaps = 19/692 (3%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||||||||||| ||||| | ||||| |||||||| | || || ||||| || ||| Sbjct 1026032 TTATCAGCGGCAGAAACATTCAAGATACCGTTGGCATCGATGTCGAAGGTGACCTCGATT 1026091 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 ||||| || || | ||||||||||||| || | | ||| | || || || Sbjct 1026092 TGAGGTACACCACGGGGAGCAGGTGGGATACCAGAAAGCTCGAAT-TCCCAAGGAGGTTG 1026150 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || || |||||| |||||||||||||| | |||||| || ||| ||| ||| Sbjct 1026151 TTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTTA 1026210 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489 || | ||||||| || | || || || ||| || ||||| | | || Sbjct 1026211 TCGGCGTAAGTTGAGAAGGTTTCAGACTTCTTGTCGGGACA-GTGGTGTTACGCTTGATG 1026269 Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549 | |||||| | |||||| || ||||| | ||| || || || |||| ||| || | Sbjct 1026270 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGGGAGAGGGGAGAGACGTCGAGG 1026329 Query 517550 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 517609 || | | || ||| || ||| ||| | ||| ||| | || ||||| | |||| Sbjct 1026330 AGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAGA-TCGCAGCTTGGACAGCA 1026388 Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 ||||| || |||||||| ||||| || |||| | | || | | |||||||| || Sbjct 1026389 GCACCGTAGGCAACAGCCTCATCGGG-TTAATGCTCTTGTTGGGCTCCTTACCATTAAAG 1026447 Query 517670 AAATTTGAAAGAAG-TTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727 || | || | || ||| | ||| ||||||||||| ||| || || || | || | Sbjct 1026448 AAGTCGGAGACGAGCTTGACGATACG--AGGAATACGAGTTGAACCGCCGACAAGGACGA 1026505 Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787 |||| ||||| | | ||||| | || ||||| | || || || || || || | Sbjct 1026506 TTTCGTGCACATTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCGA 1026565 Query 517788 GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTGA 517844 || ||| | | ||||| || ||||| ||||| || | ||||| |||| Sbjct 1026566 GA-GTGCTACGGAAAGGTCTG-GCAGAGTTCCTCGAAACGGGCACGTGTAAGGGAAGTG- 1026622 Query 517845 CATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 517903 || || ||||| || || |||| ||||| | ||| |||| || |||| | |||| Sbjct 1026623 ---TAGAAGTCAATACCCTCATACAAGGAATC-ATTTCGATCGAGGTCTGAGCGGCAGAA 1026678 Query 517904 GATAGTGCACGTTTAGCACGTTCACATGCTGT 517935 || | | ||| || |||||||| || || || Sbjct 1026679 GACAAAGTACGCTTGGCACGTTCGCAAGCGGT 1026710 Score = 87.8 bits (96), Expect = 1e-11 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 518540 GGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAAT 518599 || || || || |||| | || || ||||| || || ||| | ||| || || || Sbjct 1027470 GGGTTCATCGCGACTTGGTTCTTTGCGGCATCACCGATAAGACGCTCTCCGTCGGTGAAG 1027529 Query 518600 GAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA 518659 | ||||| || || || || || |||||||| ||||| ||||||||||||||| | | Sbjct 1027530 GCGACATAGGAAGGCGTCGTTCGGTTACCTTGGTCATTGGCAATAATTTCAACTCGATCG 1027589 Query 518660 TTTTGCCATACACCTACACAACT 518682 |||||||| ||||| ||||| || Sbjct 1027590 TTTTGCCACACACCGACACACCT 1027612 Score = 86.0 bits (94), Expect = 5e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 |||||||| || ||| | |||| || ||||||||||| || || ||| | ||||| || Sbjct 707985 GGTAAAGAGGGCCGTTTGCGAGGTAACTTGATGGGAAAGCGGGTTGATTTTTCTGCTCGA 708044 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTC 668966 || || |||||| |||||||||| | | | ||||||| |||||||||| Sbjct 708045 ACTGTGATTACTGGTGATCCCAATCTGGAATTGGATGAAGTCGGTGTTCCTC 708096 >seq27 Length=5330550 Score = 127 bits (140), Expect = 2e-23 Identities = 451/694 (65%), Gaps = 17/694 (2%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 |||||||| |||| |||| |||||| |||||||| | ||||| ||||| |||||| Sbjct 4335418 TTATCAGCAGCAGAAACATCCGAAATACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 4335477 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 ||||| | || ||||||||||||| || | ||| | || || || Sbjct 4335478 TGAGGTGCACCATGGGGAGCAGGTGGGATACCAGAAGGCTCAAACTTCCCAAGGAGGTTG 4335537 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || || |||||| | |||||||||| ||| | |||||| || ||| ||| || Sbjct 4335538 TTGTCCTTAGTGCAAGCACGTTCACCCTTGAAGACTTGGATGAGCACATCAGATTGGTTG 4335597 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489 || | ||||||| || | || || || || | || ||||| | | || Sbjct 4335598 TCGGCGTAAGTTGAGAAGGTTTCAGACTTCTTGGTCGGGACAGTGGTGTTACGCTTGATG 4335657 Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549 | |||||| | |||||| || ||||| | ||| ||||| || |||| ||| || | Sbjct 4335658 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAGG 4335717 Query 517550 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 517609 || | | || ||| | |||| ||| | ||| | ||| || ||||| | |||| Sbjct 4335718 AGAAGTAGATCCTGAG--TCTTCAGAAGTGTCACCGGATAAAATCGCAGCTTGGACAGCA 4335775 Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 ||||| || |||||||| || ||||| || | | | || | || |||||||| || Sbjct 4335776 GCACCGTAGGCAACAGCCTCGTCAGGGTTGATGCTCTTGTTGGGCTTCTTACCATTAAAG 4335835 Query 517670 AAATTTGAAAGAAG-TTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727 || | || | || ||| | ||| ||||||||||| ||| || || || |||| Sbjct 4335836 AAGTCGGAGACGAGCTTGACGATACG--AGGAATACGAGTTGAACCGCCGACAGGGACAA 4335893 Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATC-CAATAAAACTTTTTCAACGGGTTCA 517786 |||| ||||| | | ||||| | || ||||| | | | ||| || || || || Sbjct 4335894 TTTCGTGCACATTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCCTCGACAGGATCG 4335953 Query 517787 AGACCCGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGT 517842 ||| ||| | || | ||| || ||||| || || || ||||| ||| Sbjct 4335954 AGA-GTGCTACAGAAAAGGTCCTGGCAGAGTTCCTCAAAACAGGCATGTGTAAGGGAAGT 4336012 Query 517843 GACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 517901 | || || ||||| || | |||| ||||||| ||| |||| || |||| | || Sbjct 4336013 G----TAGAAGTCAATACCCTTATACAAGGAATCAATTTCGATCGAGGTCTGAGCGGCAG 4336068 Query 517902 AAGATAGTGCACGTTTAGCACGTTCACATGCTGT 517935 |||| | | | | || |||||||| || || || Sbjct 4336069 AAGAAAAAGTATGCTTGGCACGTTCGCAAGCAGT 4336102 >seq4 Length=1205196 Score = 91.5 bits (100), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || ||||||||||| || || || ||||| || |||||||| || | | | |||| Sbjct 430786 TTCTTGTCAAGACCATAGGCCAATGCGGCAGCCGTAGGTTCATTGATGACACGAAGAACA 430845 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 | |||||||||||| || || ||||| |||||||| | ||| | || || || || Sbjct 430846 TCAAGACCAGCAATCTGACCAGCGTCTTTCGTGGCTTGACGTTGGGCGTCATTGAAGTAG 430905 Query 518285 GCAGGAACAGTAATAACGGC 518304 ||||| || || ||||| || Sbjct 430906 GCAGGGACCGTGATAACAGC 430925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780820861677886