Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16]
31 sequences; 46,106,741 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 4e-18
>seq2
Length=1585523
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| |||||| | ||| |||| || ||||| || ||||| ||
Sbjct 172107 TCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAG 172166
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
||||||||||| || || | || | |||||||| || ||||| || |||
Sbjct 172167 ATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGTATCTTGGCCTTCACGTTG 172226
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || | ||| || || | || || ||||| |||||||| ||||| |||
Sbjct 172227 TCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACA 172286
Query 34971 AAGATCTGCAT 34981
||||| |||||
Sbjct 172287 AAGATTTGCAT 172297
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
|||||| || || ||||| |||||||| | || |||| || ||||| ||||| |||||
Sbjct 1022372 TTCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAA 1022313
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || ||||| ||||| | || | |||||||| || ||||| || ||
Sbjct 1022312 GATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCCTGGATCTTTGCCTTCACATT 1022253
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | ||| | ||| || || | ||| ||||| ||||| || | |||||| ||
Sbjct 1022252 GTCAATGGTATCAGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGAC 1022193
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 1022192 AAAGATCTGCAT 1022181
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
||||||||||| || || || ||||| | || |||| |||| ||| || || |||||
Sbjct 171879 TCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAA 171938
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || ||||| ||||| |||| | || |||||||| || ||| || ||
Sbjct 171939 ATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCTTAACATTG 171998
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | |||||| || | || || || ||||||||||| ||||| ||
Sbjct 171999 TCAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGACG 172058
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 172059 AAGATCTGCAT 172069
Score = 86.0 bits (94), Expect = 4e-12
Identities = 139/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| |||||||| || || || ||||| | || |||| |||| ||| || || |||||
Sbjct 171651 TCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAA 171710
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || ||||| ||||| |||| | || |||||||| |||||| || || ||
Sbjct 171711 ATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATCTTCGCCTTTAC--AT 171768
Query 34911 GCTATCGAT--TCACCGGC--CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| || || | ||| | |||||| || | || || || ||||| ||||| |||||
Sbjct 171769 --TGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTCCTGTGAGGGTCTT 171826
Query 34967 CACAAAGATCTGCATA 34982
|| ||||||||||||
Sbjct 171827 GACGAAGATCTGCATA 171842
Score = 86.0 bits (94), Expect = 4e-12
Identities = 138/195 (71%), Gaps = 9/195 (5%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||||||||||||||| ||||| | || |||| |||| ||| ||||| |||||
Sbjct 1022598 TCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTGCTTTCCAGCAAAG 1022539
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | || || ||||| | || | || || ||||| |||||| ||||| ||
Sbjct 1022538 ATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTGAC--AT 1022481
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAG-TCT 34965
| ||||| ||| | ||| || || | || || || ||||| || | | |||
Sbjct 1022480 --TGTCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTCTTTCCGGTCAATGTTCT 1022423
Query 34966 TCACAAAGATCTGCA 34980
|||||||||||||||
Sbjct 1022422 TCACAAAGATCTGCA 1022408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633477349368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |