Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq9 134 2e-26 seq23 132 5e-26 seq31 109 6e-19 >seq9 Length=652519 Score = 134 bits (148), Expect = 2e-26 Identities = 370/556 (67%), Gaps = 16/556 (3%) Strand=Plus/Minus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTA-CTTATCAATTCATTAGAAAATGTTA 19018 ||||||||| ||| ||| | ||| || || | || || | |||||| || || || | Sbjct 464842 ACATGCAAATTCAGTATGCATTCCTTCATCGCCGGCTGATGAGTTCATTTGAGAACGTCA 464783 Query 19019 AACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGA 19078 |||| ||||||| |||| || || | ||| ||||| | ||||| || ||||||| | Sbjct 464782 AACCCGGCATCAACCCTCGCTTCTTCATCCAAAATATGCAGGCAAACGACGCAGAAAAAA 464723 Query 19079 ATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATC-ATTATTA 19137 |||| ||||| | |||||||| || || | | ||| || | | | ||| ||||| Sbjct 464722 ATATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAATGT-GAATCTATTATCT 464664 Query 19138 TGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAA 19197 |||||||||| || ||||| | || || |||| | || || || || || ||||| Sbjct 464663 TGAATCCATTGAAGCGCCCATTTTGCTTTTCTTTTAATGCACGGAATAGTTTCAATAGAG 464604 Query 19198 TTAAATAGATACAT---ACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTG 19254 || |||| |||| |||||| | |||| || ||| | | || | ||| | Sbjct 464603 TTGAATA---ACATCGAACGCTCTGGAGCATCTCGAATATAGGTTTGAATAAGCAAAGAG 464547 Query 19255 TACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCT 19314 || |||| |||||||||||||| || ||||| || || || ||||| | ||| || Sbjct 464546 TAGGTTTCAGAATGAATATTTTCCATCATAATCTGGAAACCATAGAAACACCGTGCCTCC 464487 Query 19315 GTTATCTGTACTTCACTACAAAATCTTTCG-ACCAAATTTTCATTAACTATTCCATCACT 19373 | | ||||| ||| | |||| | || | | ||| || || || || ||||| Sbjct 464486 GGCACCTGTATTTCGTTGGAAAA-ATGGCGAATGAGATTCTCGTTTACAATACCATCCGA 464428 Query 19374 AGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA---TG- 19429 || ||||| || || | || | | || |||||||| | | ||| | || Sbjct 464427 CGCAGCAAAGAACGCGAGGACGCGAGACAGGAAGAATTTTTCAT-TAACGTTCAGTTTGT 464369 Query 19430 TATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCT 19489 | ||||| || | ||||| | || | ||| | ||||| |||||| || || | || Sbjct 464368 TGTTCCAGTCGGTGATATCACTTGAAAGATCAATCTCTTCCGATGTCCAGAATGACGACT 464309 Query 19490 CTGCTTTTTTATACAT 19505 |||||||| ||||| Sbjct 464308 GAGCTTTTTTGTACAT 464293 >seq23 Length=3600692 Score = 132 bits (146), Expect = 5e-26 Identities = 366/558 (66%), Gaps = 5/558 (1%) Strand=Plus/Plus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 ||| || ||||| ||||| || || |||| || || | || || ||| | |||| Sbjct 3498578 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 3498637 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 ||||||||||| || | || ||||||||||| || ||||| || || |||||||| || Sbjct 3498638 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 3498697 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139 || || || || || || || || || | ||| ||| || || | || || || | | Sbjct 3498698 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGT-GCTTCGTTTGTCAG 3498756 Query 19140 A-ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAAT 19198 | |||||||| || ||||| || || || || | || || ||||| ||||| | | Sbjct 3498757 ATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGT 3498816 Query 19199 TAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACA 19258 || ||||| || | || ||| || || |||| ||| || | | | ||| Sbjct 3498817 CGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTAAG 3498876 Query 19259 TTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTA 19318 |||| ||||||| ||||| || || || || || ||||| | | || || | | Sbjct 3498877 TTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGCTG 3498936 Query 19319 TCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTG 19378 || ||||| | |||| | || | || |||||| || || || || ||| || | Sbjct 3498937 CTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGCGG 3498996 Query 19379 CAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCC 19435 |||| ||||| | || || | || ||||| || || | ||||| |||| Sbjct 3498997 CAAAGAATGCAAGGACGTGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGTTCC 3499056 Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495 | || || ||| | || | || | ||||| ||||| || || || ||||||| Sbjct 3499057 AGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTGCTT 3499116 Query 19496 TTTTATACATGTTCCATA 19513 | || ||||| | ||||| Sbjct 3499117 TCTTGTACATCTGCCATA 3499134 >seq31 Length=1678028 Score = 109 bits (120), Expect = 6e-19 Identities = 146/198 (74%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 18676 TATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT-TCCAT 18734 ||||||| |||| |||||||| ||||| |||||||| || | ||||| ||| ||||| Sbjct 618277 TATTCGGATACTCGCTTTTCAAAAAAATTTGTTTTTCCTTCCAGAGATAT-CATGTCCAT 618335 Query 18735 AAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATA-GTAGTC 18793 |||||||| || ||| | || || |||| ||| ||| ||| || | | || | |||| Sbjct 618336 GAAATCAAAAGGGTTTCTGACGTTGTATAATTTGTTGT-TCCCAAGTGCATTAAGCAGTC 618394 Query 18794 TATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTAA 18853 |||||| | || | || ||| || ||||| ||| ||||||||||||| || | || Sbjct 618395 CATCCGCAATGAACTCGATGTATATGCACATCAGCTCATAATTCATTCCTATCAAGTCAA 618454 Query 18854 CAGGTAGTGCATCTGTAA 18871 | || | |||||| ||| Sbjct 618455 CTGGAATAGCATCTATAA 618472 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063 |||| ||||||||| ||||| ||||| |||||||| || || ||||||||||||| Sbjct 580037 GCTGCTTTTGTTCGCAAATAGTACATTCCAGTCTTCAAGCCCTTCTTCCATCCATAGAAG 580096 Query 47064 TGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTC 47123 |||||||| || |||| | ||||| || || ||| ||||| | | |||||| Sbjct 580097 TGCATACTTGTCAATTGACTTGTCGTAGGTGATGCAAAATGGATATTGACACTTTGACTT 580156 Query 47124 TGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAAT 47164 ||| |||||| | || | || ||||| | ||| | ||| Sbjct 580157 TGACAAATAAACGGCCCACGGTCGGCTGCTAGATCGAGAAT 580197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108582182840