Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq28 89.7 2e-12 >seq28 Length=2065898 Score = 89.7 bits (98), Expect = 2e-12 Identities = 219/329 (67%), Gaps = 10/329 (3%) Strand=Plus/Minus Query 302544 TACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAAT 302603 |||||| |||||||| || ||||| |||||| | || | || ||||| || || Sbjct 709868 TACGGTTCCATCATAACAAACCATAACGTCTTCGAGGGCTTTCACCAATCGACGTTGTAT 709809 Query 302604 ATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGC 302663 ||| || ||| | || || || || ||||| || ||||| | || || |||| || Sbjct 709808 ATATCCGGTTTCGGCAGTCTTGACTGCAGTATCGATGAGACCTTCTCGCCCCGCCATGGC 709749 Query 302664 ATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACG 302723 ||||||||| | ||| | || || || | | | | ||| |||| |||||||| || Sbjct 709748 ATGGAAGAAGAACTCCTGAGGGGTGAGACCTCGTAGATAAGAGTTCTCTACGAAACCCCG 709689 Query 302724 CGCCTCGGG---CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCC 302780 | ||| || |||| || |||||||||||| ||||| || | || |||| Sbjct 709688 GGACTCAGGACTGAAATCATC---CTTGGTAAAGTGAGGCAGCGTGCGGTGACGGAAGCC 709632 Query 302781 GTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAAT 302840 | |||||||| || || ||| |||||||| | || | |||||| || || Sbjct 709631 AAAAGGGATACGACGCCCTTCCACGGATTGCTGTCCTACACAAACAGACATCTGGGAGAT 709572 Query 302841 ATT--TAAATCACTGCCCTTGGAGCCAGC 302867 ||| | ||| | || ||||| ||||| Sbjct 709571 ATTGATGAATGA--ACCTTTGGATCCAGC 709545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817015412447