Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq29 96.9 4e-14 >seq29 Length=5849119 Score = 96.9 bits (106), Expect = 4e-14 Identities = 200/293 (68%), Gaps = 5/293 (2%) Strand=Plus/Minus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| ||| || || |||||||| | ||||| || || | ||| ||||| | | Sbjct 5169099 TATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAGCCAGGCATTAATC 5169040 Query 869232 CGCGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACG 869290 | |||||||| | ||||||||||| ||| ||| ||| ||||| || ||||| || || Sbjct 5169039 CACGCTTCTTCATCCAAAAGATGGACGC-GAAGGAGCCAGAGAAGAAAATGCCTTCAACA 5168981 Query 869291 GCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTC 869350 || |||||| | | ||| |||||| | || ||| | || | ||||||| | | Sbjct 5168980 GCAGCAAAGGCTACGAGACGCTCGCCGAA--AACCGA-GTGTTCGTCACTGATCCAGTGC 5168924 Query 869351 ATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGG 869410 | ||||| |||||||| | | | | || | || ||||| || ||| ||| Sbjct 5168923 AGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATAGTCTCGATAGCATCAAAAAGGAAA 5168864 Query 869411 TCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || |||| | ||||| |||| || |||||||| || || || || ||||| Sbjct 5168863 TCACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGTCTC 5168811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136655994827