Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq29 132 8e-25 >seq29 Length=5849119 Score = 132 bits (146), Expect = 8e-25 Identities = 228/328 (70%), Gaps = 5/328 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTT-GCTAAAGCAGAGGCCGGGCATGAGGCCGCGCT 794398 ||| || || |||||||| | ||||| | || || || || ||||| | || |||| Sbjct 5169092 ACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAG-CCAGGCATTAATCCACGCT 5169034 Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 |||| | ||||||||||| ||| ||| ||||| || ||||| || || || |||| Sbjct 5169033 TCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAAAATGCCTTCAACAGCAGCAA 5168974 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 || | ||||| |||||| | ||| || | || | ||||||| | || |||| Sbjct 5168973 AGGCTACGAGACGCTCGCCGAAAA---CCGAGTGTTCGTCACTGATCCAGTGCAGAGCCC 5168917 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 |||| ||||| | | | | || | || ||||| || ||| ||| || | Sbjct 5168916 ACTCGGCCTTGCGCTTGATGCAAGGAATAGTCTCGATAGCATCAAAAAGGAAATCACGTT 5168857 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 |||| ||||| |||| ||| ||||||||||| || ||||| ||||| ||||| ||||| | Sbjct 5168856 CGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGTCTCGGAGTGAATGTTCT 5168797 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || |||||||| || || ||||| Sbjct 5168796 CCATCATAATCTGGAACCCGTAGAAGCA 5168769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243102388609