Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2 132 3e-26 >seq2 Length=1585523 Score = 132 bits (146), Expect = 3e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||||||||| ||||| || ||| |||| |||| Sbjct 172086 AGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCT 172145 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| |||||||| || || | || | |||||||| || Sbjct 172146 TCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCC 172205 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||| || || ||| | |||| || | |||||| || | || || || Sbjct 172206 TGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTT 172265 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||||||||||||| |||||||| |||||| Sbjct 172266 TTGCCCGTGAGGGTCTTAACAAAGATTTGCATG 172298 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||| |||||||| || || || || || |||| |||| Sbjct 171858 AGGACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCC 171917 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || || || || ||||| ||||| |||| | || |||||||| Sbjct 171918 TCCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCC 171977 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || || | || | ||| | ||| || |||| || || ||| Sbjct 171978 TGGATTTTCGCCTTAACATTGTCAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTC 172037 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||||||| ||||| || |||||||||||| Sbjct 172038 TTTCCCGTGAGTGTCTTGACGAAGATCTGCATG 172070 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || || ||||| ||||| || |||| |||| || || |||||||| || ||| Sbjct 1022371 TCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAG 1022312 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| ||||| | || | |||||||| || | || ||| || || Sbjct 1022311 ATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCCTGGATCTTTGCCTTCACATTG 1022252 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | |||||| || | ||| ||||||||||| || | ||||| ||| Sbjct 1022251 TCAATGGTATCAGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACA 1022192 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 1022191 AAGATCTGCAT 1022181 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/210 (71%), Gaps = 9/210 (4%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| ||| ||| ||||||||||||||||| || || | || |||| |||| Sbjct 1022613 AGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAAC 1022554 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 |||||||| || ||||||| || || ||||| | || | || || ||||| | || Sbjct 1022553 TGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATC 1022494 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 ||| ||||| || | ||||| ||| | |||||| |||| || || ||||| Sbjct 1022493 TTTGCCTTGAC--AT--TGTCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTCTT 1022438 Query 34948 TCCCGT-GAGGGTCTTTACAAAGATCTGCA 34976 ||| || | | |||| ||||||||||||| Sbjct 1022437 TCCGGTCAATGTTCTTCACAAAGATCTGCA 1022408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692676949189