Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq29 176 3e-38 seq28 147 2e-29 seq27 131 1e-24 seq4 91.5 1e-12 >seq29 Length=5849119 Score = 176 bits (194), Expect = 3e-38 Identities = 462/694 (67%), Gaps = 16/694 (2%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||||||||||| ||||| | |||||| |||||||| | ||||| ||||| |||||| Sbjct 3850404 TTATCAGCGGCAGAAACATTCAAAATACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 3850345 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCC-AGATTATT 281535 ||||| || || | ||||||||||||| || || | | ||||| || || Sbjct 3850344 TGAGGTACACCACGGGGAGCAGGTGGGAT-ACTAGAAAGCTCGAACTTCCCAAGGAGGTT 3850286 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595 || || |||||| |||||||||||||| | |||||| || ||| ||| || Sbjct 3850285 GTTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTT 3850226 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 281655 ||| | ||||||| ||| | || || || || | || ||||| | | || Sbjct 3850225 ATCAGCGTAAGTTGAAAAGGTTTCAGACTTCTTGATCGGGACAGTGGTGTTACGCTTGAT 3850166 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715 |||||| | ||||||||| ||||| | ||| ||||| || |||| ||| || | Sbjct 3850165 GGGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAG 3850106 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 281775 || | | || ||| || ||| ||| | ||| || || || ||||| | ||| Sbjct 3850105 GAGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAGGATCGCAGCTTGGACAGC 3850046 Query 281776 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 281835 |||||| || |||||||| |||||||| || | | | || | | ||||||||||| Sbjct 3850045 AGCACCGTAGGCAACAGCCTCATCAGGGTTGATGCTCTTGTTGGGCTCCTTACCATTGAA 3849986 Query 281836 AAAATTTGA-AAGAAGTTGTC-TTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893 || | || | || ||| | ||| ||||||||||| || || || || | || Sbjct 3849985 GAAGTCGGAGACGAGCTTGACGATAC--GAGGAATACGAGTCGAACCGCCGACAAGGACG 3849928 Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953 ||||| || || | | ||||| | || ||||| | || || || || || || Sbjct 3849927 ATTTCGTGTACGTTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCG 3849868 Query 281954 AGACCAGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGT 282009 ||| ||| | || | | | || ||||| ||||| || | ||||| ||| Sbjct 3849867 AGA-GTGCTACGGAAAAGGCCCTGGCAGAGTTCCTCGAAACGGGCACGTGTAAGGGAAGT 3849809 Query 282010 GACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 282068 | || || ||||| || || |||| ||||||| ||| |||| || |||| | || Sbjct 3849808 G----TAGAAGTCAATACCCTCATACAAGGAATCAATTTCGATCGAGGTCTGAGCGGCAG 3849753 Query 282069 AAGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 |||||| | ||| || |||||||| || || || Sbjct 3849752 AAGATAAAGTACGCTTGGCACGTTCGCAAGCAGT 3849719 >seq28 Length=2065898 Score = 147 bits (162), Expect = 2e-29 Identities = 457/692 (66%), Gaps = 19/692 (3%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||||||||||| ||||| | ||||| |||||||| | || || ||||| || ||| Sbjct 1026032 TTATCAGCGGCAGAAACATTCAAGATACCGTTGGCATCGATGTCGAAGGTGACCTCGATT 1026091 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| || || | ||||||||||||| || | | ||| | || || || Sbjct 1026092 TGAGGTACACCACGGGGAGCAGGTGGGATACCAGAAAGCTCGAAT-TCCCAAGGAGGTTG 1026150 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || || |||||| |||||||||||||| | |||||| || ||| ||| ||| Sbjct 1026151 TTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTTA 1026210 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 281656 || | ||||||| || | || || || ||| || ||||| | | || Sbjct 1026211 TCGGCGTAAGTTGAGAAGGTTTCAGACTTCTTGTCGGGACA-GTGGTGTTACGCTTGATG 1026269 Query 281657 ATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 281716 | |||||| | ||||||||| ||||| | ||| || || || |||| ||| || | Sbjct 1026270 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGGGAGAGGGGAGAGACGTCGAGG 1026329 Query 281717 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 281776 || | | || ||| || ||| ||| | ||| ||| | || ||||| | |||| Sbjct 1026330 AGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAGA-TCGCAGCTTGGACAGCA 1026388 Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 ||||| || |||||||| ||||| || |||| | | || | | |||||||| || Sbjct 1026389 GCACCGTAGGCAACAGCCTCATCGGG-TTAATGCTCTTGTTGGGCTCCTTACCATTAAAG 1026447 Query 281837 AAATTTGAAAGAAG-TTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894 || | || | || ||| | ||| ||||||||||| ||| || || || | || | Sbjct 1026448 AAGTCGGAGACGAGCTTGACGATACG--AGGAATACGAGTTGAACCGCCGACAAGGACGA 1026505 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 281954 |||| ||||| | | ||||| | || ||||| | || || || || || || | Sbjct 1026506 TTTCGTGCACATTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCGA 1026565 Query 281955 GACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTGA 282011 || ||| | | ||||| || ||||| ||||| || | ||||| |||| Sbjct 1026566 GA-GTGCTACGGAAAGGTCTG-GCAGAGTTCCTCGAAACGGGCACGTGTAAGGGAAGTG- 1026622 Query 282012 CATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 282070 || || ||||| || || |||| ||||| | ||| |||| || |||| | |||| Sbjct 1026623 ---TAGAAGTCAATACCCTCATACAAGGAATC-ATTTCGATCGAGGTCTGAGCGGCAGAA 1026678 Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 || | | ||| || |||||||| || || || Sbjct 1026679 GACAAAGTACGCTTGGCACGTTCGCAAGCGGT 1026710 Score = 89.7 bits (98), Expect = 4e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 |||||||| || ||| | |||| || |||||||||||||| || ||| | ||||| || Sbjct 707985 GGTAAAGAGGGCCGTTTGCGAGGTAACTTGATGGGAAAGCGGGTTGATTTTTCTGCTCGA 708044 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||||| ||| | | | ||||||| |||||||||| || ||| Sbjct 708045 ACTGTGATTACTGGTGATCCCAATCTGGAATTGGATGAAGTCGGTGTTCCTCGCAGTATC 708104 Query 432408 GC 432409 || Sbjct 708105 GC 708106 Score = 86.0 bits (94), Expect = 5e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 282720 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 282779 |||| | || || ||||| || || ||| | ||| || || || | ||||| || | Sbjct 1027483 CTTGGTTCTTTGCGGCATCACCGATAAGACGCTCTCCGTCGGTGAAGGCGACATAGGAAG 1027542 Query 282780 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 282839 | || || || |||||||| ||||| ||||||||||||||| | | |||||||| |||| Sbjct 1027543 GCGTCGTTCGGTTACCTTGGTCATTGGCAATAATTTCAACTCGATCGTTTTGCCACACAC 1027602 Query 282840 CTACACAACT 282849 | ||||| || Sbjct 1027603 CGACACACCT 1027612 >seq27 Length=5330550 Score = 131 bits (144), Expect = 1e-24 Identities = 452/694 (65%), Gaps = 17/694 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 |||||||| |||| |||| |||||| |||||||| | ||||| ||||| |||||| Sbjct 4335418 TTATCAGCAGCAGAAACATCCGAAATACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 4335477 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| | || ||||||||||||| || | ||| | || || || Sbjct 4335478 TGAGGTGCACCATGGGGAGCAGGTGGGATACCAGAAGGCTCAAACTTCCCAAGGAGGTTG 4335537 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || || |||||| | |||||||||| ||| | |||||| || ||| ||| || Sbjct 4335538 TTGTCCTTAGTGCAAGCACGTTCACCCTTGAAGACTTGGATGAGCACATCAGATTGGTTG 4335597 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 281656 || | ||||||| || | || || || || | || ||||| | | || Sbjct 4335598 TCGGCGTAAGTTGAGAAGGTTTCAGACTTCTTGGTCGGGACAGTGGTGTTACGCTTGATG 4335657 Query 281657 ATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 281716 | |||||| | ||||||||| ||||| | ||| ||||| || |||| ||| || | Sbjct 4335658 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAGG 4335717 Query 281717 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 281776 || | | || ||| | |||| ||| | ||| | ||| || ||||| | |||| Sbjct 4335718 AGAAGTAGATCCTGAG--TCTTCAGAAGTGTCACCGGATAAAATCGCAGCTTGGACAGCA 4335775 Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 ||||| || |||||||| || ||||| || | | | || | || |||||||| || Sbjct 4335776 GCACCGTAGGCAACAGCCTCGTCAGGGTTGATGCTCTTGTTGGGCTTCTTACCATTAAAG 4335835 Query 281837 AAATTTGAAAGAAG-TTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894 || | || | || ||| | ||| ||||||||||| ||| || || || |||| Sbjct 4335836 AAGTCGGAGACGAGCTTGACGATACG--AGGAATACGAGTTGAACCGCCGACAGGGACAA 4335893 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATC-CAATAAAACTTTTTCAACGGGTTCA 281953 |||| ||||| | | ||||| | || ||||| | | | ||| || || || || Sbjct 4335894 TTTCGTGCACATTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCCTCGACAGGATCG 4335953 Query 281954 AGACCAGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGT 282009 ||| ||| | || | ||| || ||||| || || || ||||| ||| Sbjct 4335954 AGA-GTGCTACAGAAAAGGTCCTGGCAGAGTTCCTCAAAACAGGCATGTGTAAGGGAAGT 4336012 Query 282010 GACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 282068 | || || ||||| || | |||| ||||||| ||| |||| || |||| | || Sbjct 4336013 G----TAGAAGTCAATACCCTTATACAAGGAATCAATTTCGATCGAGGTCTGAGCGGCAG 4336068 Query 282069 AAGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 |||| | | | | || |||||||| || || || Sbjct 4336069 AAGAAAAAGTATGCTTGGCACGTTCGCAAGCAGT 4336102 >seq4 Length=1205196 Score = 91.5 bits (100), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || ||||||||||| || || || ||||| || |||||||| || | | | |||| Sbjct 430786 TTCTTGTCAAGACCATAGGCCAATGCGGCAGCCGTAGGTTCATTGATGACACGAAGAACA 430845 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | |||||||||||| || || ||||| |||||||| | ||| | || || || || Sbjct 430846 TCAAGACCAGCAATCTGACCAGCGTCTTTCGTGGCTTGACGTTGGGCGTCATTGAAGTAG 430905 Query 282452 GCAGGAACAGTAATAACGGC 282471 ||||| || || ||||| || Sbjct 430906 GCAGGGACCGTGATAACAGC 430925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740628878031006